Pairwise Alignments

Query, 302 a.a., LysR family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

Subject, 303 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  166 bits (421), Expect = 5e-46
 Identities = 100/297 (33%), Positives = 157/297 (52%), Gaps = 4/297 (1%)

Query: 1   MQDLNDLYYFAKVVEAGGFAAAGRVLGIPKSRLSRRIAELEERLGARLLQRTTRQLKLTA 60
           M DLN +  FA VV A GF+ A R  G PKS +SR+IA+LEE LG RLLQR TR L LT 
Sbjct: 1   MPDLNGMMLFAAVVRAKGFSQAARETGHPKSTISRKIAQLEEELGVRLLQRDTRNLSLTQ 60

Query: 61  VGERYLRHCQAMLLEAEMADEAVASMSSEPRGRLRVSCPVGLAHEFLPSVISTFLERFPQ 120
           VG  + +HC ++  E E A   + S   +  G LR++ PV  + E + ++ S F+  +P 
Sbjct: 61  VGALFYQHCDSIRNEVEAAKAVIESTHDDVSGSLRIAIPVSFSQELIANLCSGFMRLYPN 120

Query: 121 VQLEMQLLNRRVDLVTEGIDVALRVRDLGDEDPLLVTRRLRQAQMVMIASPAFIREHPI- 179
           V+L++Q  +  + LV EG D+A++   L   D  LV R L + Q +++ASP +++     
Sbjct: 121 VELDVQFTDNDIGLVGEGYDIAIKYGPLQSSD--LVARLLFERQPILVASPGYLKTRGTP 178

Query: 180 NSPEDLKQVPVLGALEADRMVHVRMLDAQGTTCDLTLEARLGIDDFIVRKACTLAGLGFT 239
            +P++L     +  L   R   +  L        ++ + ++ ++  I+ K   L   G  
Sbjct: 179 ATPKELSDHSGI-LLGTSRSAPIWPLGKGTRKTMVSFQRKVRVNSPIMVKQLALDDFGIA 237

Query: 240 LLPMMYCEEELENGSLVQLLPEWSLPGGWLLAVYPHRRGLLPAVRAWIDHLTESFKA 296
           +L    C+ EL NG LV +L EW +    +  VY  RR L   + A++D   + F +
Sbjct: 238 MLSNSACKTELANGQLVPILQEWPMEPFKVYGVYSSRRQLATNISAFLDFFVKRFSS 294