Pairwise Alignments

Query, 236 a.a., amino acid ABC transporter permease from Pseudomonas fluorescens FW300-N2E3

Subject, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  179 bits (454), Expect = 4e-50
 Identities = 97/214 (45%), Positives = 137/214 (64%), Gaps = 5/214 (2%)

Query: 21  TGLAMTLWLLVVSIVLGFCLSLPLAIMRTSRWGLLRWPVQLFTYVFRGTPLYIQLLICYS 80
           +GL  T+WL+ +S+V+G   ++PLAI R S+      P   + Y  RGTPL +QL + Y 
Sbjct: 15  SGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRGTPLLVQLYLIYY 74

Query: 81  GIYGIAVVRSQPLLEAFFRDAMNCTLLAFTLNTCAYTVEIFAGAIRSIPYGEIEAAHAYG 140
           G+      +  P+ +  +  A  C L+AF LNT AYT EI  GAI  +P GE+EAA AYG
Sbjct: 75  GMD-----QWFPVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKGEVEAAKAYG 129

Query: 141 LSGWRLYVKLILPSALRRALPYYSNEVILMLHATSVAFTATIPDILKVARDANAATFMTF 200
           +S ++ Y ++ILPSALRR+LP YSNEVI MLH ++VA   TI D+   AR  N+  +  F
Sbjct: 130 MSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLVNSRYYAPF 189

Query: 201 QAFGIAGLLYLALSFGLVGAFRLAEKRWLNFLGP 234
           +AF  AGL Y+AL+F ++  F+ AE+R+L +L P
Sbjct: 190 EAFLSAGLFYMALTFIILWCFKQAEQRFLAYLKP 223