Pairwise Alignments

Query, 306 a.a., malonate decarboxylase subunit epsilon from Pseudomonas fluorescens FW300-N2E3

Subject, 308 a.a., malonyl CoA-acyl carrier protein transacylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  154 bits (390), Expect = 2e-42
 Identities = 112/283 (39%), Positives = 141/283 (49%), Gaps = 12/283 (4%)

Query: 6   VFPGQGAQQPGMLHRLPKA------TVIEASEVLGEDVLLL---DSTQALKSTRAVQLCL 56
           VFPGQG+Q  GML  L         T  EASEVLG D+  L      + L  T   Q  L
Sbjct: 7   VFPGQGSQALGMLAELAAVQPIVGQTFAEASEVLGYDLWALVQDGPVETLNETDKTQPAL 66

Query: 57  LIAGTAAARSLLQQGCTADYV-AGLSIGAYPAAVVAGALRFSDALHLVSLRGELMQQAWP 115
           L A  A  R+ L  G     V AG S+G Y A V AG + F DA+ LV LRG+LMQQA P
Sbjct: 67  LAASVAIWRAYLASGKAMPAVLAGHSLGEYSALVCAGVIDFKDAIKLVELRGQLMQQAVP 126

Query: 116 QGYG-MTAIIGLDLATVEGLLAQVHSSETPVYLANINADNQLVIAGSDAAMNAVAELAKG 174
            G G M AIIGLD   +     +    E  V   N N+  Q+VIAG   A+   A   K 
Sbjct: 127 AGTGAMYAIIGLDNDGIANACIEAAQGEV-VSPVNFNSPGQVVIAGQKDAVERAAAACKA 185

Query: 175 CGAGLAKRLSVSVPSHCPLLDEPAQVLAEAFAKVPLKLPTIGYLSGSRARPIRSVEALRE 234
            GA +A  L VSVPSHC L+   A  LA A   V    P+I  ++        +V  +++
Sbjct: 186 SGAKMAVALPVSVPSHCALMKPAADKLALALNNVQFNAPSITVINNVDVASPTAVADIKD 245

Query: 235 DLAFNMCRVVDWRGTVQSAYERGVRLHIELPPGAVLTGLARRV 277
            L   +   V W  TV+   E+G+   +E  PG VLTGL +R+
Sbjct: 246 ALVRQLYCPVRWSETVELMAEKGITQLVECGPGKVLTGLTKRI 288