Pairwise Alignments

Query, 754 a.a., ATP-dependent DNA helicase from Pseudomonas fluorescens FW300-N2E3

Subject, 641 a.a., helicase c2 (RefSeq) from Shewanella loihica PV-4

 Score = 50.1 bits (118), Expect = 4e-10
 Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 25/239 (10%)

Query: 520 STVMFSATLSPQR---YYADLLGLPATTVWIDVESPFNAEQLKVQIVSRISTRFVHRQAS 576
           S +  SATL   R    +   +GL      I ++SPF+  +  +  V R       ++ +
Sbjct: 397 SWIFTSATLQINRDLSLFTKAMGLEKANTSI-LDSPFDYRRQSLFCVPRHLASVTSQERA 455

Query: 577 LAPIVELMARQFIERPGNYLAFFSSFDYLQQVAQLFAETWPQINLWSQSRGMDEARRQAF 636
              +VE+  +      G     F+S   L  VA +      +I+     +G  +A +Q  
Sbjct: 456 ARQLVEVAVKAINAAKGRTFMLFTSHRMLNLVAVMLQG---RIDYPLLVQG--QAGKQTL 510

Query: 637 LEQFTPTSQGIGFAVL--GGAFGEGIDLPGSRLIGAFIATLGLAQLNPVNEQLKQRMAAI 694
           L+++    + +G AVL   GAF EG+D+ G  L    I  L    ++P +   K R   +
Sbjct: 511 LKKY----RQLGNAVLLGTGAFWEGVDVRGKLLSCVIIDKLPF--VSPDDNLYKARADGV 564

Query: 695 FDAGYDYTYLFPGVQKVV---QAAGRVIRTQQDQGVVMLIDDR-----FGESKVQQLLP 745
              G D        Q V+   Q  GR+IR ++D+GV++L D+R     +G++ +  L P
Sbjct: 565 QREGKDPFMTLSLPQAVIALNQGVGRLIRDEKDRGVLILCDNRIVNRPYGQAFINSLPP 623



 Score = 28.5 bits (62), Expect = 0.001
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 184 RPGQRHLAESVFKAVSTGRCLMAQAPTGIGKTVGTLFPML 223
           R  Q+ +A  V + +  G  L+ +A TG+GKT   L P L
Sbjct: 29  RVQQQTMATRVSETLQKGDNLVVEAGTGVGKTYAYLVPAL 68