Pairwise Alignments

Query, 754 a.a., ATP-dependent DNA helicase from Pseudomonas fluorescens FW300-N2E3

Subject, 669 a.a., ATP-dependent DNA helicase from Methanococcus maripaludis JJ

 Score = 78.6 bits (192), Expect = 1e-18
 Identities = 144/645 (22%), Positives = 257/645 (39%), Gaps = 103/645 (15%)

Query: 178 FAYPDFRPGQRHLAESVFKAVSTGRCLMAQAPTGIGKTVGTLFPMLKAFAPQQLDKVFFL 237
           F Y   RP Q  L   +++ V+  + L+ +APTG+GKT+  L P L  +  ++  +V  L
Sbjct: 14  FPYHGMRPQQEVLMGKIYECVTKKKNLVVEAPTGVGKTLSYLIPAL--YFAERGKRVMIL 71

Query: 238 TAKTPGRKLALDAAQVIVDNSDGLP--LRVLEMIARDKA-CEHLDKACHGESCPLAKGFY 294
           T         +D  + IV++ + L   L+V  M+ +    C+   +  +   C L KG  
Sbjct: 72  TE-------TIDQQERIVEDLNSLKHNLKVSFMMGKGNFFCKSKGEKANTLYCQLNKGCI 124

Query: 295 DRLPAAREAASRVTLLDQAALREIALEHQ---VCPYYLSQEMARWADVVVADYNYYFDFS 351
            R P  +      T  ++         +    +C Y  ++  +  A+++V + + Y+   
Sbjct: 125 YR-PNKKPVCVCGTKKEKIEFDGNTTFYCPLCLCDYQKAKIESFDANIIVMNNSIYYYLK 183

Query: 352 ALLFGLAQANQWKVAVLVDEAHNLVERGRQMYSASLD-QFALNTLRKSAPEV----LKKS 406
             +    Q +     V+ DEAH L    R   +  ++ ++AL  LR  A       L+  
Sbjct: 184 DEIDKKKQTD----IVICDEAHKLEGSIRNAATIVINPKYALRRLRFMAYHYSNSRLRVH 239

Query: 407 LQRVNREWNALHKTQISPY----------------QAYAKAPEKLLQALSLCTTAIGDY- 449
           + RV  E + +  T +  Y                  +      L + +++  T +  Y 
Sbjct: 240 MDRVTEEDDEIFWTIVEDYVVKNASGKDCKNSLVFDGFKITSFGLKEDVAILGTLLEGYN 299

Query: 450 -----------LNDHPQGLDAAVQSFYFD-------ALQF---SRVAELFDEHFLFDISK 488
                      L+++ + L+     F  D        LQF    R++++    FL     
Sbjct: 300 EIVKIKEKIEDLSENEE-LEKKDLKFKIDNKALIPLELQFVADRRISDVPMVEFL----- 353

Query: 489 RDLGNTRSLS----------QLCLRNVVPAGFIRPRLTAARSTVMFSATLSPQRYYADLL 538
            +LGN R+++           +    V+ + ++  RL    S V  SATL   + +A   
Sbjct: 354 ENLGNLRNITGNFVVYKNNGSILCEPVLVSTYLN-RLYGDASVVHCSATLGDLKIHAIKT 412

Query: 539 GLPATTVWIDVESPFNAEQLKVQIVSR------ISTRFVHRQASLAPIVELMARQFIERP 592
           G+  +   + ++SPF+ ++  +  +S        S  F           E + +      
Sbjct: 413 GMGRSETLL-LDSPFSKDRRNIIALSDGEDMKFNSIDFQSNNKKRNKANENLFKMVNAAK 471

Query: 593 GNYLAFFSSFDYLQQVAQLFAETWPQINLWSQSRGMDEARRQAFLEQFTPTSQGIGFAVL 652
           GN L  F SF  L+   + F +   + N++    GMD    +   E F       G  + 
Sbjct: 472 GNTLILFKSFGDLKTAHEYFLDARYRGNIYCYESGMDGKAAKKLKEDFQKYG---GLLLA 528

Query: 653 GGAFGEGIDLPGSRLIGAFIATLGLAQLNPV--------NEQLKQRMAAIFDAGYD---Y 701
            G F EG+D+PG  L    I +L      P+         E+LK R   + DA +     
Sbjct: 529 TGRFAEGVDIPGDALTCVIIDSLPFPVPTPLLKREQTLLEERLKSRK--VKDAHWSAFLM 586

Query: 702 TYLFPGVQKVVQAAGRVIRTQQDQGVVMLIDDRFGESKVQQLLPR 746
           T      + V+Q  GR+IRT+ D GVV++ D RF +    ++L R
Sbjct: 587 TSFHIMARTVIQMIGRLIRTETDYGVVVIQDKRFNDWVGSEMLKR 631