Pairwise Alignments

Query, 1025 a.a., DNA polymerase from Pseudomonas fluorescens FW300-N2E3

Subject, 1026 a.a., DNA-directed DNA polymerase III (polc) from Pseudomonas stutzeri RCH2

 Score = 1500 bits (3884), Expect = 0.0
 Identities = 755/1025 (73%), Positives = 848/1025 (82%), Gaps = 1/1025 (0%)

Query: 1    MSAGYAELHCLSNFSFQRGASSALELFERAKRQGYQALAITDECTLAGIVRAWQAAKALE 60
            M+  YAELHCLSNFSFQRGASSA ELFERAKRQGY ALAITDEC+LAGIVRAWQA+K   
Sbjct: 1    MNTEYAELHCLSNFSFQRGASSARELFERAKRQGYDALAITDECSLAGIVRAWQASKDTG 60

Query: 61   LPLIIGSEMRIENGPKLVLLVENLEGYQALCRLITHARRRTEKGQYRVLREDFNG-PLPG 119
            LPLIIGSE++IE GPKLVLLVENL GYQALC+LIT ARRR EKG+Y+ LRED    PL G
Sbjct: 61   LPLIIGSELQIEGGPKLVLLVENLTGYQALCQLITRARRRAEKGRYQALREDLRDWPLEG 120

Query: 120  LLALWVPDAVDALEHGAWLKGIFGERLWLAVELHYGQNDARRLADWQALATRLQIPVVAS 179
            LLA+W+PD   A   G WL   F ERLWL +ELH G +DA +L      A+RL I  VA 
Sbjct: 121  LLAIWLPDHDGADAEGRWLLDRFRERLWLGIELHRGPDDALQLRQSLTQASRLGISAVAC 180

Query: 180  GDVHMHARGRRALQDTMTAIRLHVRVADAGQRLHPNGERHLRSLEALRELYPASLLEETL 239
            GDVHMHARGRRALQD MTAIR H+ VA+AG+ L PNGERHLRS E L +LYPA LL ETL
Sbjct: 181  GDVHMHARGRRALQDCMTAIRHHLPVAEAGRHLFPNGERHLRSREELAQLYPAELLAETL 240

Query: 240  IIARRCTFDLGQLRYQYPRELVPEGQTPTSWLRRLTEQGLSRRWPEGPDSTVMALIEKEL 299
             I++RC F L QL+Y YP ELVP G   TSWLR+L E G   RWP+G      A +E EL
Sbjct: 241  RISQRCHFQLDQLKYHYPHELVPPGHDTTSWLRKLVEDGARWRWPDGIPEKARAQLEHEL 300

Query: 300  KLIAELGYESYFLTVEDIVSFARSQRILCQGRGSAANSAVCYALGITEIDPSRTSMLFER 359
            +LIA+L YESYFLTV DIV FAR Q ILCQGRGSAANS+VC+ LGITE+DP R+ +LFER
Sbjct: 301  ELIADLHYESYFLTVHDIVRFAREQGILCQGRGSAANSSVCFVLGITELDPVRSKLLFER 360

Query: 360  FLSKERNEPPDIDVDFEHERREEVLQYVFQRYGRTRAALTAVVSTYHGAGAIRDVAKALG 419
            FLS+ERNEPPDIDVDFEH+RREEV+QYVFQRYGR RAALTAV S+Y   GA+RDVAKALG
Sbjct: 361  FLSRERNEPPDIDVDFEHDRREEVIQYVFQRYGRNRAALTAVASSYRATGALRDVAKALG 420

Query: 420  LPPDQVNALADCCGHWSDDVPPLERLREGGFDPDSPVLRQVLSLTRQLIGFPRHLSQHPG 479
            LPPDQ+NALA CCG WS+ +P   +LRE GFDPD+PVLR+VL LT  LIGFPRHLSQHPG
Sbjct: 421  LPPDQINALAGCCGRWSEHIPDDSQLREAGFDPDNPVLRRVLVLTDALIGFPRHLSQHPG 480

Query: 480  GFVISEQPLDSLVPVENAAMAERTIIQWDKDDLDMVGLLKVDILALGMLSAIRRCFDLLR 539
            GFVISEQPLD+LVP+ENA+MA+RT+IQWDKDDLD VGLLKVD+LALGMLSAIRRCFDL+ 
Sbjct: 481  GFVISEQPLDTLVPIENASMADRTVIQWDKDDLDAVGLLKVDVLALGMLSAIRRCFDLIE 540

Query: 540  DHRGRDLSLANIPSEDPQTYEMISRADTIGVFQIESRAQMSMLPRLKPQNFYDLVIEVAI 599
             +RG   ++A +P+ED  TYEMISRADTIGVFQIESRAQM+MLPRL+P+ FYDLVI+VAI
Sbjct: 541  HYRGTRWTIATLPAEDKPTYEMISRADTIGVFQIESRAQMAMLPRLRPKTFYDLVIQVAI 600

Query: 600  VRPGPIQGGMVHPYLRRRNKEEPETYPSVQLEAVLKRTLGVPLFQEQVMQIAIVAADYSP 659
            VRPGPIQG MVHPYLRRRNKEE   YPS +L+ V +RTLGVPLFQEQVM++AIVAA+Y+P
Sbjct: 601  VRPGPIQGDMVHPYLRRRNKEEDVDYPSEELKPVFERTLGVPLFQEQVMELAIVAAEYTP 660

Query: 660  GEADQLRRCMAAWKRHGGLEPHQKRLREGMLKNGYSEEFAAQIFEQIKGFGSYGFPESHA 719
             EAD+LRR MAAWKRHG LEPH+ RL E ML  GY  +F A+IFEQIKGFGSYGFPESHA
Sbjct: 661  DEADKLRRAMAAWKRHGSLEPHRVRLTERMLAKGYQPDFIARIFEQIKGFGSYGFPESHA 720

Query: 720  ASFALLTYASCWLKCHEPAAFACALINSWPMGFYSPDQILQDARRHHLQIRPVDVAASDW 779
            ASFALLTYASCWLK HEPAAFACALINSWPMGFY+PDQILQDARRH L+IRPVDV  S W
Sbjct: 721  ASFALLTYASCWLKRHEPAAFACALINSWPMGFYNPDQILQDARRHGLEIRPVDVRHSGW 780

Query: 780  DCSLEPIDGEQPAIRLGLRMIKGFREDDARRIEAARLQGEFIDIADLGERARLDVRAQEQ 839
            DCSLEP   EQPAIRLGLRM++ FRE DARRIEAAR +  F +I DL  RA L+ RA+EQ
Sbjct: 781  DCSLEPCSQEQPAIRLGLRMVRSFREADARRIEAARQRQPFTNIHDLCLRAELEPRAREQ 840

Query: 840  LADAGALRRLAGDRHRARWEVAGVQKQLGLFAGLPSQEEPCVVLPKPTVSEDLQADYSSV 899
            LADAG LR LAG RHRARW VAGV+ QL LFA LP+ EE  + LP P+VSEDL  DY+++
Sbjct: 841  LADAGVLRGLAGHRHRARWAVAGVEPQLPLFASLPATEETPINLPLPSVSEDLLNDYATL 900

Query: 900  GTTLGPHPLALLRDELRARRCRSSRELLEVEHGRNVSVAGLVTGRQRPGTASGVTFVTLE 959
            GTTLGPHPLALLRDEL+ARRCRSSREL  +EHGR VS+AGLV GRQRP TASGV FVTLE
Sbjct: 901  GTTLGPHPLALLRDELKARRCRSSRELAMIEHGRPVSIAGLVIGRQRPQTASGVIFVTLE 960

Query: 960  DEFGNINVVVWRDLAERQRKALIGSQLLKIDGRWEKVGEVRHLIAGRLSDLSPLLNGISV 1019
            DEFG +NVVVWRDLAERQR+ LI SQLL++DG  E    VRHLIAGRLSDL+PLL G+ V
Sbjct: 961  DEFGMVNVVVWRDLAERQRRPLIQSQLLRVDGHLESASGVRHLIAGRLSDLTPLLTGLDV 1020

Query: 1020 HSRDF 1024
             SRDF
Sbjct: 1021 RSRDF 1025