Pairwise Alignments

Query, 471 a.a., DNA repair nucleotidyltransferase from Pseudomonas fluorescens FW300-N2E3

Subject, 684 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 86.7 bits (213), Expect = 2e-21
 Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 3/225 (1%)

Query: 171 MPVERIGLEQTVATALSRMGLRTLGQVQALPRQTLARRFEAQVLKHLDTLLGERPLALGF 230
           +P+  + L + V  +   MGL  +  + ALP + L  RF   VL  L  L G+ P    F
Sbjct: 292 LPLSILPLPEHVLQSCENMGLTQVQALLALPLKELGERFGESVLTLLAQLKGQLPQVHEF 351

Query: 231 YLPPDRFDVRIELNFDVQSHQALLFPLRRLTGDLSAFLCGRDSGVQRFDLHL--EHAGLP 288
           YL P+ +  ++EL ++V   + L FPL R+   LSA+L  R   V    L L      L 
Sbjct: 352 YLMPESYRHKLELLYEVSHLEGLAFPLGRMLATLSAYLVQRQQAVLALSLTLVFRDLSLV 411

Query: 289 DTLIKVGLLSAERDPAMLFELARGRLEQVQVEAPVRGFRLSAQDLPSFVPQRRELFDERP 348
               ++    AE     L +L R +LE + + APV    + A  L   + Q    +    
Sbjct: 412 PLRCEIRYPFAEHRGDALLKLCRVQLESLILAAPVISLAIQADTLVPLLVQTSNWWQGEG 471

Query: 349 QQSLPWEQLRERLRARLGDEAVQGLGFQSDHRPECAWLPNAQPQA 393
           +      +L   L ARLG + V+GL   S H PE +W   +  Q+
Sbjct: 472 KSDATM-RLLSLLEARLGADKVKGLEHCSHHLPELSWQSRSLSQS 515



 Score = 56.6 bits (135), Expect = 3e-12
 Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 5/69 (7%)

Query: 402 RPGWLLTEPLPVHEGTARILMGPERIESGWWDGADVRRDYYLIETRTGSKAWAYRTVGEA 461
           RP WLL +P P+   +  +L GPER+ S W   A   RDYYL     G   W +R+    
Sbjct: 620 RPNWLLRQPEPLAPESVSLLKGPERLHSPW--SAASPRDYYLARMHQGGLCWVFRS---P 674

Query: 462 GPLWLQGWF 470
             L+LQGWF
Sbjct: 675 EGLFLQGWF 683



 Score = 45.1 bits (105), Expect = 8e-09
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%)

Query: 1  MRWVCILFPQLALDAVLRQRSDPDEPLVLLSGPAQRRVLQAVNAPARALGLRPGQSMTAA 60
          M W+ + FP   L      +  P    + L      ++L A +A A+ LG+ PGQS+  A
Sbjct: 1  MLWLAVYFPHWLLQYQSYHQGLPQGGELALFERQSSQILIASSAAAK-LGVEPGQSLATA 59

Query: 61 QALSKAFVSTDYDVAEIEHWQQFLAAWAYRFSSQV 95
          QAL  +     YD +  +    +L  W+Y +S++V
Sbjct: 60 QALCPSLQLLAYDPSLSQEASHWLCQWSYGYSARV 94