Pairwise Alignments

Query, 221 a.a., LuxR family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

Subject, 206 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  134 bits (336), Expect = 2e-36
 Identities = 80/208 (38%), Positives = 124/208 (59%), Gaps = 12/208 (5%)

Query: 2   YKILIADDHPLFREAIHNVISDGFPGSEVMETAD-LESALTLTRQHDDLDLILLDLNMPG 60
           + ++IADDHPL+ +A+ N +    PG++V +  + +E   +L  Q +++DL+++DL MPG
Sbjct: 5   FHVMIADDHPLYLDALVNGLVSHLPGTQVSQANNYIELFDSLYLQVEEIDLLIMDLFMPG 64

Query: 61  MHGLNGLINLRNEAPTIPVVIVSAEQDKQVVLQAITYGAVGFITKSSPRSQMTEAIEQIL 120
             G  GL  LR + PT+P+V++SA  D     Q I +GA  FI+KS+  + + + +EQIL
Sbjct: 65  SSGYAGLSFLRTQFPTLPIVVISALDDLIARSQCIQHGAA-FISKSTAPTNIFKQVEQIL 123

Query: 121 NGNVYLPPDIIRTQKSAFTRRMSETPSFPPELLQALTRKQLLVLERMTKGESNKQIAYTL 180
           +G+   P           T+  S   +   + ++ LT  Q  VL  +  G SNK IA +L
Sbjct: 124 DGSYQFP----------LTQIKSSIETINAKKIKTLTPSQFRVLHLIAAGHSNKTIADSL 173

Query: 181 DIAETTVKAHVSAILRKLNVHNRVQAIL 208
           +I+E TVKAH+SAI  KL+V NR QA L
Sbjct: 174 NISEKTVKAHISAIFEKLDVKNRTQAAL 201