Pairwise Alignments

Query, 221 a.a., LuxR family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

Subject, 220 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  155 bits (392), Expect = 6e-43
 Identities = 89/215 (41%), Positives = 128/215 (59%), Gaps = 13/215 (6%)

Query: 4   ILIADDHPLFREAIHNVISDGFPGSEVMETADLESAL--TLTRQHDDLDLILLDLNMPGM 61
           I+IADDHPLFR A+   +S  F  ++  E AD   AL   L       DL+LLDL MPG 
Sbjct: 8   IIIADDHPLFRNALRQALSSAFEHTQWFE-ADSADALQSVLDSPTVSYDLVLLDLQMPGS 66

Query: 62  HGLNGLINLRNEAPTIPVVIVSAEQDKQVVLQAITYGAVGFITKSSPRSQMTEAIEQILN 121
           HG + LI+LR+  P +PV+++SA +D   + +AI YG  GFI KS+    + EA+  +L 
Sbjct: 67  HGYSTLIHLRSHYPDLPVIVISAHEDINTISRAIHYGGSGFIPKSASMETLKEALTAVLY 126

Query: 122 GNVYLP--PDIIRTQKSAFTRRMSETPSFPPELLQALTRKQLLVLERMTKGESNKQIAYT 179
           G+++LP   DII  +  +  +  S+        L  LT +Q  VL+   +G  NKQIAY 
Sbjct: 127 GDIWLPKGADIIPIEDDSTDKMASK--------LSDLTPQQYKVLQMFAEGLLNKQIAYD 178

Query: 180 LDIAETTVKAHVSAILRKLNVHNRVQAILSAGDID 214
           L ++E T+KAH +AI RKL V NR QA+++ G ++
Sbjct: 179 LGVSEATIKAHATAIFRKLGVRNRTQAVIALGQLE 213