Pairwise Alignments

Query, 342 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

Subject, 320 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

 Score = 89.7 bits (221), Expect = 9e-23
 Identities = 82/298 (27%), Positives = 136/298 (45%), Gaps = 30/298 (10%)

Query: 48  KAECVLVLITMVWGGTFLLVQHAMTVS--------GPMFFVGLRFAAAASIVALFSWRSL 99
           +A  +L+L++ +WG  F+  + A            GP+ F G RF   A +V  F+ R  
Sbjct: 11  RASLILLLVSFIWGSAFVAQKTAFDAVEGATAPALGPLAFTGARFLLGALVVLPFALREN 70

Query: 100 RELT--------LFELKAGAFIGVAIMLGYGLQTVGLQTILSSQSAFITALYVPFVPLLQ 151
           R+          L  +  G  IG  +      Q +G+     + + F+TALYVP VP++ 
Sbjct: 71  RQARSRGAPGAGLLAIFCG--IGAVLFAASFTQQLGIIGTSVTNAGFLTALYVPLVPVVA 128

Query: 152 WLVLGRRPGLMPSIGIMLAFTGLMLLSGPAGASLN-FSSGEIATLISAVAIAAEIILIST 210
            ++  +    M   G      GL LL+G A   L+  ++G++  L+ A+  A  + ++  
Sbjct: 129 LVIFRQSVRKMIWPGAAGCLAGLWLLTGAATNGLSALTAGDLWVLVGALFWAFHVTVVGV 188

Query: 211 YAGRVDVRRVTV--VQLATTSVL----AFLMIVPTQEALPGFSWLLLASAVGLGAASAAI 264
            A R   R +T+   Q  T  VL    AF    PT   +   +  +  + +     +  +
Sbjct: 189 MATR-SGRPLTLAAAQFLTCGVLGWAGAFAFETPTLAGMAAIAPEIAYAGILSVGVAFTL 247

Query: 265 QVAMNWAQKSVSPTRATLIYAGEPVWAGIAGRLA-GERLPGLALFGAGLIVAAVIVSE 321
           QV    AQ+   P  A +I + E V+A +A  +  GERL G+   GAGLI+A++I  E
Sbjct: 248 QVV---AQRHTHPAAAAIILSMEMVFASLAAVVVLGERLSGVQWLGAGLILASIIAVE 302