Pairwise Alignments

Query, 342 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

Subject, 316 a.a., membrane protein containing DUF6, transmembrane from Marinobacter adhaerens HP15

 Score = 90.1 bits (222), Expect = 7e-23
 Identities = 86/308 (27%), Positives = 144/308 (46%), Gaps = 29/308 (9%)

Query: 48  KAECVLVLITMVWGGTFLLVQHAMTVSGPMFFVGLRFAAAASIVALFSWRSLRELTLFEL 107
           K++ +LV++T+    +++  + A+ +  P+ F+  RF  A +++A F+ RSL +L++ +L
Sbjct: 6   KSDLLLVVVTLFAAISWMFSKEAVLLMPPLMFMAARFLIAGTVLAFFARRSLMKLSVDQL 65

Query: 108 KAGAFIGVAIMLGYGLQTVGLQTILS-SQSAFITALYVPFVPLLQWLVLGRRPGLMPSIG 166
           +    +G+          +GL  I S  + AF+T+L V  VP++  LV          + 
Sbjct: 66  RRSVGVGLVFGTAMTCWVMGLVHITSLGEGAFLTSLGVVIVPIIARLVFKEAQPPSTWLA 125

Query: 167 IMLAFTGLMLLSGPAGASLNFSSGEIATLISAVAIAAEIILISTYAG------------- 213
           I +A  GL LLS   G      +G+I  +++A   A    L +  A              
Sbjct: 126 IPIAVAGLALLSLENG--FRPEAGQIFFVMAATIFALYFNLNTRAANQRTVINRLGRTVE 183

Query: 214 --RVDVRRVTVVQLATTSVLAFL--MIV----PTQEAL-PGFSWLLLASAVGLGAASAAI 264
             RV    +T + L T  +L  +  MI+    PT   L P  +W ++ASAV +G A   +
Sbjct: 184 KHRVPALPLTAIALLTVGLLTLVESMIMEPWRPTLNNLSPMLAWWVVASAV-IGTAGRFL 242

Query: 265 QVAMNWAQKSVSPTRATLIYAGEPVWAGI-AGRLAGERLPGLALFGAGLIVAAVIVSELR 323
                +AQ   + +   +I   EPVW  + A    GE + G+ L G GLI AA+IV+   
Sbjct: 243 --LQTFAQSLSANSHGVVILVLEPVWVALFAAGWFGESMTGIQLAGCGLIFAALIVNRWA 300

Query: 324 TKGKGAVE 331
              K   E
Sbjct: 301 VLSKAIKE 308