Pairwise Alignments

Query, 536 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

Subject, 673 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  139 bits (349), Expect = 4e-37
 Identities = 94/264 (35%), Positives = 142/264 (53%), Gaps = 4/264 (1%)

Query: 96  ALSAAGVAYSVK--QLAGKLQSQLDAAAQIVSSAEVMIGTEKATSQLSQQALSAASEAHQ 153
           ALS A    SV+  +LA  +    D  AQ+ ++ + M  T    ++ +     AA  A+ 
Sbjct: 404 ALSDAAGELSVRMGELARNVVESTDETAQVATAMDEMNATVVEVTRNASATAEAADLANN 463

Query: 154 SSVLGSTVLAESITRMHQLSVRANDSRELIEALSVRSEDIQRVTLVIQTIASQTNLLALN 213
            +  G   +  ++    Q++ RA      +  L+ R+++I RV  VI  IA QTNLLALN
Sbjct: 464 EAQQGGNEMQATVAETRQVAERAAGLAASLNDLAARADNIGRVIDVINEIADQTNLLALN 523

Query: 214 AAIEAARAGEHGRGFAVVADEVRGLAGRTATATGEVGLMVADIQQRTAQVVEQIRQLSSD 273
           AAIEAARAG+ GRGFAVVADEVR LA +T TAT EV   + DIQ  TAQ V+++ +    
Sbjct: 524 AAIEAARAGDAGRGFAVVADEVRKLAEKTMTATKEVEHAIKDIQTGTAQAVDEMTRTRGQ 583

Query: 274 LNSGVEQVEHTGQQLQNIARLAAGVEAQVGEIASGSSNNHQQLDSLFHAVEQMRSDLAVS 333
           + +  ++ E TG+ L  I R A  +   V  IA+ S       D +   V ++ +DL+  
Sbjct: 584 VEATADKAEGTGEALGRIVRRAVNIADMVRNIATASEQQSATSDEINRNVTRI-NDLSRD 642

Query: 334 DQQTRHLAQAAV-QMEGQAETISE 356
             +  H A+A++ ++ G A  + E
Sbjct: 643 IAERIHTAEASINEVSGMARRLGE 666



 Score = 35.8 bits (81), Expect = 5e-06
 Identities = 28/155 (18%), Positives = 64/155 (41%), Gaps = 27/155 (17%)

Query: 226 RGFAVVADEVRGLAGRTATATGEVGLMVADIQQRTAQVVEQIRQLSSDLNSGVEQVEHTG 285
           R    VA+EV G+A   + A GE+ + + ++ +   +  ++  Q+++ ++          
Sbjct: 389 RNLLEVAEEVTGVARALSDAAGELSVRMGELARNVVESTDETAQVATAMDE--------- 439

Query: 286 QQLQNIARLAAGVEAQVGEIASGSSNNHQQLDSLFHAVEQMRSDLAVSDQQTRHLAQAAV 345
                       + A V E+   +S   +  D   +  +Q  +++  +  +TR +A+ A 
Sbjct: 440 ------------MNATVVEVTRNASATAEAADLANNEAQQGGNEMQATVAETRQVAERAA 487

Query: 346 QMEGQAETISERLAEVGLDDYHQRIYDLAREGASQ 380
            +      ++ R   +G      R+ D+  E A Q
Sbjct: 488 GLAASLNDLAARADNIG------RVIDVINEIADQ 516