Pairwise Alignments

Query, 536 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

Subject, 543 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  124 bits (312), Expect = 7e-33
 Identities = 92/288 (31%), Positives = 143/288 (49%), Gaps = 29/288 (10%)

Query: 80  AITELTRDLSYSTSHNALSAA---GVAYSVKQLAGKLQS---QLDAAAQIVSSAEVMIGT 133
           AI   T+D+S +  + A  +    G++Y  +Q    + +   ++ AA + V+S  +   T
Sbjct: 266 AIISQTKDVSQTVENLATKSTTTIGISYEQEQFVDTIVTAVNEMSAAVREVASNALHTAT 325

Query: 134 EKATSQLSQQALSAASEAHQSSVLGSTVLAESITRMHQLSVRANDSRELIEALSVRSEDI 193
           E              ++ +  ++ G  +L +S+  + QLS     +  +IE LSV S +I
Sbjct: 326 E-------------ITKVNDQTIEGKNILTQSVNHIQQLSESVKQAVAVIEKLSVNSANI 372

Query: 194 QRVTLVIQTIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAGRTATATGEVGLMV 253
             V  VI++IA QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT T+T ++  M+
Sbjct: 373 ASVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTETSTQDIQRMI 432

Query: 254 ADIQQRTAQVVEQIRQLSSDLNSGVEQVEHTGQQLQNIARLAAGVEAQVGEIASGSSNNH 313
            ++Q+     V+ I   +S  NS V     T   L  I    + V     + A+ +    
Sbjct: 433 EELQRGVNDAVKSIESGASLTNSTVTLASQTQDALDEILNSTSKVSEMSTQTATAT---- 488

Query: 314 QQLDSLFHAVEQMRSDLAVSDQQTRH---LAQAAVQMEGQAETISERL 358
              +   H  E++  +L     +TR+   + Q   Q+    +TI   L
Sbjct: 489 ---EEQTHVTEEINRNLTELSDKTRYCNTVIQETQQIVVNTQTICSNL 533