Pairwise Alignments

Query, 500 a.a., methylmalonate-semialdehyde dehydrogenase from Pseudomonas fluorescens FW300-N2E3

Subject, 501 a.a., methylmalonate-semialdehyde dehydrogenase (RefSeq) from Shewanella loihica PV-4

 Score =  467 bits (1201), Expect = e-136
 Identities = 231/479 (48%), Positives = 321/479 (67%), Gaps = 3/479 (0%)

Query: 7   IGHYLNGQ-VQDTGSERFSNVFNPATGAIQARVGLASQQTVDEAVASALRAFPAWSEQSS 65
           + HY++GQ +  +G ++ S V NPA   + A +  A+ + V+ A+ASA +AF  W E   
Sbjct: 5   VKHYIDGQFILGSGQQQIS-VTNPANNEVIATINAATVEEVETAIASAKQAFATWKEVPV 63

Query: 66  LRRSRVMFKFKELLDRHHNELAEIISREHGKVFSDAKGEVTRGIEIVEYACGAPNLLKTE 125
             R+RVMF+++ LL  HH+E+A I+++E GK F DAKG+V RGIE+ E+AC   +L+  E
Sbjct: 64  SERARVMFRYQHLLKLHHDEIATILAQETGKTFEDAKGDVWRGIEVAEHACNIASLIMGE 123

Query: 126 FSDNIGGGIDNWNLRQPLGVCAGVTPFNFPVMVPLWMIPLALVTGNCFILKPSERDPSAS 185
             +N+   ID ++  QPLGVCAG+TPFNFP M+PLWM PLA+  GN F+LKPSE+DP   
Sbjct: 124 TVENVARSIDTYSYTQPLGVCAGITPFNFPAMIPLWMFPLAIACGNTFVLKPSEQDPLTP 183

Query: 186 LLMARLLTEAGLPDGVFSVVQGDKSAVDALLQHPDIEAISFVGSTPIAEYIHQQATARGK 245
             +  L  EAG P GV  +V GDK+AVD LL H DI+AISFVGS  + +YI++  T   K
Sbjct: 184 QRLVELFEEAGAPKGVLQLVHGDKTAVDVLLSHQDIKAISFVGSVGVGQYIYKTGTDNLK 243

Query: 246 RVQALGGAKNHMIVMPDADLDQAADALIGAAFGSAGERCMAISIAVAVGDVGDKLIAKLL 305
           RVQA  GAKNH ++MPDA+  Q  + L+GA+ G+AG+RCMA+S+AV VG+   K I +L 
Sbjct: 244 RVQAFAGAKNHCVIMPDANKQQVINNLVGASVGAAGQRCMALSVAVFVGE-AKKWIPELR 302

Query: 306 PRIDQLKVGNGMQGDSDMGPLVTAEHKAKVEGFIDQGVAQGAQLIVDGRGFKVPGAENGF 365
             I +++ G     D+  GP+++   KA+V   I QG  +GA+ ++DG  F V G ENG 
Sbjct: 303 DAIAKVRPGVWDDKDAAYGPVISPAAKARVLKLIAQGKEEGAECLLDGSDFTVEGYENGN 362

Query: 366 FVGATLFDKVTTEMSIYQQEIFGPVLGIVRVADFASAVALINAHEFGNGVSCFTSDGGIA 425
           +VG T+F  VTT+MSIY++EIFGPVL  + V     A+ L+N   +GNG S FT+ G  A
Sbjct: 363 WVGPTMFTNVTTDMSIYKEEIFGPVLCCMEVESLEEAIELVNNSPYGNGTSIFTACGAAA 422

Query: 426 RAFARTIKVGMVGINVPIPVPMAWHSFGGWKRSLFGDHHAYGEEGIRFYSRYKSVMQRW 484
           R +   I+VG VGINVPIPVP+ + SF GWK S +GD HAYG++ +RFY+  K++  RW
Sbjct: 423 RKYQHNIEVGQVGINVPIPVPLPFFSFTGWKGSFYGDQHAYGKQAVRFYTETKTITARW 481