Pairwise Alignments

Query, 547 a.a., long-chain fatty acid--CoA ligase from Pseudomonas fluorescens FW300-N2E3

Subject, 542 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  227 bits (578), Expect = 1e-63
 Identities = 163/517 (31%), Positives = 252/517 (48%), Gaps = 20/517 (3%)

Query: 32  PGREIVYADKLRYSYQTLNQRIRRLANALTAAGVKAGDTVALLDWDSHRYLECFFAVPMI 91
           P R  +   K RY++    QR RRLA+AL A G+   DTVA++  ++    E  F VPM 
Sbjct: 33  PDRPSLVHGKRRYTWAETAQRARRLASALRARGIGPEDTVAVMGANTPELYEAHFGVPMA 92

Query: 92  GAVLHTVNIRLSADQVLFTMNHAEDDLVLVHDDFLPLVEQIQGQLSTVKGYLQLTDDTAT 151
           GAVL+ +N+RL+A+++ F + H E  ++L   +F P++     ++      + + D    
Sbjct: 93  GAVLNALNVRLNAEEIAFILEHGEARVLLTDTEFSPIIADALARIDRPITVIDIVDPEYD 152

Query: 152 DTSLPVLG-EYEQLLSQA--ADQYQFPDFDENSVATLFYTTGTTGDPKGVYFTHRQLVLH 208
                V   EYE  L++      +++P  DE    TL YT+GTTG+PKGV + HR   L+
Sbjct: 153 GPGACVGEMEYEAFLAEGDPTADWRWPA-DEWESITLNYTSGTTGNPKGVVYHHRGAYLN 211

Query: 209 TLNAVGTLGVYQGLPLLRSDDVYMPITPMFHVHAWGVPYVATLMGLKQVYPGRYEPNRLV 268
            L+ + T G       +    VY+   PMFH + W  P+         V   R     + 
Sbjct: 212 ALSNIITWG-------MPHHAVYLWTLPMFHCNGWCFPWTMAANAGTNVCLRRVTAAGIF 264

Query: 269 RLYREESVTFSHCVPTLLQMILGCEEAAQTRFDGWKMLLGGSALTLGIASEASAR-GIRV 327
           +   EE V+     P +L  ++      +  FD    ++  +A       E   R G  V
Sbjct: 265 QAIAEEKVSHFCGAPIVLSFLINARPEERRSFDHQVNVMTAAAPPPASVLEKMQREGFCV 324

Query: 328 HSGYGMSETCPLLCTTYLRDEELQLPTQSQLAIRIKTGTPVPMVD-LKIVDANGND-MPH 385
              YG++ET         ++    LP   Q  ++ + G    + + L + D    + +P 
Sbjct: 325 THVYGLTETYGPATVCAWKEPWNDLPMDEQARLKSRQGVRYLVQEGLMVGDPETMEAVPA 384

Query: 386 DGESVGEIVVRAPWLTQGYWKAPEKGAELWRDGWMHTGDIASIDALGGVEIKDRIKDVIK 445
           DGES+GE+  R     +GY K PE  AE +R GW HTGD+  +   G +++KDR KD+I 
Sbjct: 385 DGESMGEVFFRGNITMKGYLKNPEATAEAFRGGWFHTGDLGVLHPDGYLQLKDRSKDIII 444

Query: 446 TGGEWISSLELESLISEHSAVMSVAVVGIADEQWGERPMALVVCAPGQYLDRKILEVHLQ 505
           +GGE ISS+E+E ++  H  V++ AVV   DE+WGE P A V    G      + E  L 
Sbjct: 445 SGGENISSIEVEGVLHRHPDVVAAAVVAKPDEKWGETPKAYVELRDG----ATVTEDELV 500

Query: 506 GFVERGRINKWAIPKQFKFVTEIPKTSVGKINKKLIR 542
            F  R  +  +  P+  + V  +PKTS GKI K ++R
Sbjct: 501 AFC-RLHLAHYKCPRDVE-VGPLPKTSTGKIQKFVLR 535