Pairwise Alignments

Query, 547 a.a., long-chain fatty acid--CoA ligase from Pseudomonas fluorescens FW300-N2E3

Subject, 546 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  325 bits (833), Expect = 3e-93
 Identities = 196/535 (36%), Positives = 284/535 (53%), Gaps = 19/535 (3%)

Query: 17  PLLIKQLLLSGVRYEPGREIVY----ADKLRYSYQTLNQRIRRLANALTAAGVKAGDTVA 72
           PLL+  ++    R     E+V         R +Y     R RRLA AL   G   GD + 
Sbjct: 10  PLLLSGVIEHAARCHGETEVVSRRDDGTLHRQTYADTASRARRLARALIELGAAPGDAIG 69

Query: 73  LLDWDSHRYLECFFAVPMIGAVLHTVNIRLSADQVLFTMNHAEDDLVLVHDDFLPLVEQI 132
            L W+ +R+LE ++ VP  G V HT+N RL A+Q+ F +  A D  + V   FL L+  I
Sbjct: 70  TLAWNGNRHLELYYGVPGAGMVCHTINPRLFAEQIAFIIKDAGDRFLFVDPGFLGLLAGI 129

Query: 133 QGQLSTVKGYLQLTDDT--ATDTSLPVLGEYEQLLSQAADQYQFPDFDENSVATLFYTTG 190
              L  ++  + + D    A    + +L   E L +Q  D + +P FDEN+ A + YT+G
Sbjct: 130 LPDLPALEAVVVMDDHAPAAELAGVRLLAYEEVLAAQTDDAFDWPSFDENAAAGICYTSG 189

Query: 191 TTGDPKGVYFTHRQLVLHTLNAVGTLGVYQGLPLLRSDDVYMPITPMFHVHAWGVPYVAT 250
           TTG+PKGV ++HR  +LH L+AV        +  L + D  MP+ PMFHV+AWG+P+ A 
Sbjct: 190 TTGNPKGVVYSHRSTILHALSAV-----QPDVFALSARDTVMPVVPMFHVNAWGMPHAAP 244

Query: 251 LMGLKQVYPG-RYEPNRLVRLYREESVTFSHCVPTLLQMILGCEEAAQTRFDGW-KMLLG 308
           ++G K V PG R +   L+ L R E VT +  VPT+ Q +LG  EA         ++++G
Sbjct: 245 MVGAKLVLPGGRLDGASLIELIRGEQVTATAGVPTVWQGLLGHVEAKGGGLAPLDRVVIG 304

Query: 309 GSALTLGIASEASARGIRVHSGYGMSETCPLLCTTYLRDEELQLPTQSQLAIRIKTGTPV 368
           G+A    + S  +A G R    +GM+ET PL   + L      L     L +R+K G P 
Sbjct: 305 GAACPQSMMSRFAALGTRAIHAWGMTETSPLCVASVLTARHRDLGEDEALRLRLKQGRPA 364

Query: 369 PMVDLKIVDANGNDMPHDGESVGEIVVRAPWLTQGYWKAPEKGAELWRDGWMHTGDIASI 428
              +L+IVD  G  +P DG + G + VR PW+  GY   P++ A    DGW  TGD+A+I
Sbjct: 365 FGAELRIVDHAGRALPWDGVTRGMLEVRGPWICAGYLNNPDRTA-FSADGWFATGDVATI 423

Query: 429 DALGGVEIKDRIKDVIKTGGEWISSLELESLISEHSAVMSVAVVGIADEQWGERPMALVV 488
              G ++I DR KDVIK+GGEWISS+ LE++   H AV  VA +   D +WGERP  +V 
Sbjct: 424 TTDGFMDIVDRTKDVIKSGGEWISSIALENIAIGHPAVREVAAIARPDARWGERPRLIVA 483

Query: 489 CAPGQYLDRKILEVHLQGFVERGRINKWAIPKQFKFVTEIPKTSVGKINKKLIRE 543
              G  L    +    +     G++ KW IP     V  +P T+ GK+ K+ +R+
Sbjct: 484 LREGATLTPGEMAAWFE-----GKVAKWWIPDDLVIVETLPHTATGKLQKRELRQ 533