Pairwise Alignments

Query, 336 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

Subject, 316 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 93.6 bits (231), Expect = 6e-24
 Identities = 87/300 (29%), Positives = 142/300 (47%), Gaps = 23/300 (7%)

Query: 24  LIVAAAASFLSEHYGAPVMLFALLLGMALNFLASDGACKAGIEFTARTVLRIGVALLGMR 83
           + V AA   L+    +P+   AL+LG  L   AS G         A T   +  +++G+ 
Sbjct: 17  VFVCAALLCLAPVISSPM---ALVLGFTL---ASLGWVPNDWNIAALTKKLLSYSIIGLG 70

Query: 84  ITLEQIAALGWKP--FALVVILVVVTISVSVVAAKALGFQRLFGMLTGGATAICGASAAM 141
             +   AA+        L+V  ++ T+ +  +  +AL F  + G L    TAICG SA  
Sbjct: 71  FGINFNAAIEASSHNLGLIVGSIIFTLILGFLVTRALKFDPITGHLIASGTAICGGSAIA 130

Query: 142 ALAAALPNHPQKERATLFTVIGVSALSTTAMILYPMIANWLSLSPQVAGMFLGGTIHDVA 201
           A++ A+   P +    L  V     L++ A+ L+P + + L++S    G++    IHD +
Sbjct: 131 AVSPAINAKPDQTATALACVF---VLNSVALFLFPALGHLLNMSQYDFGVWSAIAIHDTS 187

Query: 202 QVVGAGYSLSTETGDIATVVKLMRVAMLLPVILCATLITRMQGADTSGKRPPLLPWFAVG 261
            VVGA  +   E    AT +KL R   ++P+ L + LI          KR   LP+F +G
Sbjct: 188 SVVGAASAYGDEALKTATTIKLARALWIIPIALVSALIF------GGNKRKLNLPYF-IG 240

Query: 262 FLLLACINSTGWVAPAVQGSVNEL---SRWSLVVSISALGMKTQLKELAAVGIKPILLMV 318
           F  LA I    W+ P  Q   + L   S+ +LV+ +  +G    ++++ A G KP+LL V
Sbjct: 241 FYCLA-IAIAHWL-PQFQPLYDTLFMVSKRTLVLCLFLIGAGITVQKMRASGPKPLLLGV 298



 Score = 24.3 bits (51), Expect = 0.004
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 69  ARTVLRIGVALLGMRITLEQIAALGWKPFALVVIL 103
           ++  L + + L+G  IT++++ A G KP  L VIL
Sbjct: 266 SKRTLVLCLFLIGAGITVQKMRASGPKPLLLGVIL 300