Pairwise Alignments

Query, 1096 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2E3

Subject, 889 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  409 bits (1050), Expect = e-118
 Identities = 237/569 (41%), Positives = 337/569 (59%), Gaps = 15/569 (2%)

Query: 523  LRDITQQQRSEAALKASEEKFAKAFHSSPDAITITERDSGRYLEVNDGFCRLTGYSADEV 582
            +R ++       A   S  +      S PD   I + ++ R+  VN+ + R+ G  A+E+
Sbjct: 313  VRAVSMAHTMTNAYDESSSRIRALLDSIPDLAWIKD-NAFRFHAVNEAYARMCGKPAEEI 371

Query: 583  VGKTVYQIGIWAEEKQRSTLL--AALKAKGRVHHQEMLGRNKRGEILTVEVSIEPITLNE 640
            VGKTV+Q+  W E   R+      A+ A G+  H E+L  N  G+  T++    P+   E
Sbjct: 372  VGKTVFQV--WPEALARTFQNHDEAVLASGKPGHFEVLVTNGEGQPRTLDYIRVPVHNEE 429

Query: 641  TACLLMT--ARDVSLLKNAEAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGA 698
               + M   ARD++  K AEA+IRHLA HD LT+LPNR+LL  R++  I          A
Sbjct: 430  GEVVGMAGIARDITERKEAEARIRHLAEHDALTDLPNRSLLSSRMADAINRSVGSQAPMA 489

Query: 699  LLFLDLDHFKHINDSLGHPVGDTVLKIITARLEASVRMEDTVARLGGDEFVVLLSGLEGT 758
            LL LDLDHFK+INDSLGH VGD +L++   RL  ++   DT++R GGDEF +LL+   G 
Sbjct: 490  LLLLDLDHFKNINDSLGHEVGDKLLQLAAERLRHTLDAADTLSRSGGDEFAILLTECSG- 548

Query: 759  RNEVSEQVRELADTLRELLSEPMFLDGQRLQVTPSIGVALIPDHGSTPTDLLKRADIALY 818
                +  +  +A  L E +++P  +DG  L ++ S+G+++ P  G+    LLK AD A+Y
Sbjct: 549  ----APMIGRIAQRLLETMAQPFNVDGHELVLSASVGISMYPHDGTDLGALLKNADAAMY 604

Query: 819  RAKDSGRNATQMFHNTMQKAASERLRMETDLRLALSRGEFSVQYQPQVDALDGRIIGAEA 878
             AK +GRN  Q F   M     ERL +E  LR AL R E  + YQPQ     G  IG EA
Sbjct: 605  SAKAAGRNTYQFFTPEMNARVFERLSLENSLRKALPRQELMLYYQPQYRVGGGDPIGFEA 664

Query: 879  LVRWRHPRLGEQSPSEFIKVLEDSGLILEVGAWILDETCQAFRQLIDRGLIDPLNFSLCV 938
            L+RWRHP LG   P+ FI + E++ LIL +G W+L E C+  +Q+  +    P   ++ V
Sbjct: 665  LLRWRHPELGLVPPARFIPIAEETNLILPIGEWVLAEACR--QQMAWQRAGQPAT-TVAV 721

Query: 939  NISPRQFRQNDFVERIEQTLSSHGLPYSLLKLEVTEGIVIQNLDDTISKMRRLKKLGVSF 998
            N+SP QFRQ + V  +++ L+  GLP + L+LE+TE +++ + +  +  +  LK LG+  
Sbjct: 722  NLSPVQFRQRNLVSLVQRVLAETGLPAAQLELEITESLLMDDTERAVEVLHELKSLGIRL 781

Query: 999  AMDDFGTGYSSLTYLKRLPVDTLKIDQSFIRDATSDPNDAEIIRAIVAMARSLELTVIAE 1058
            ++DDFGTGYSSL+YLKR P+D +KIDQSF+RD   D  DA II+AI+A+A  LEL VIAE
Sbjct: 782  SLDDFGTGYSSLSYLKRFPLDKIKIDQSFVRDMIKDSGDAAIIQAIIAIAAKLELGVIAE 841

Query: 1059 GVETTEQLDFLQGLGCHLYQGYLHSQPLP 1087
            GVE   QLD+L    C   QGYL S P+P
Sbjct: 842  GVENQSQLDYLALHQCGEVQGYLFSPPVP 870