Pairwise Alignments

Query, 1096 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2E3

Subject, 959 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  408 bits (1049), Expect = e-118
 Identities = 244/556 (43%), Positives = 331/556 (59%), Gaps = 15/556 (2%)

Query: 544  AKAFHSSPDAITITERDSGRYLEVNDGFCRLTGYSADEVVGKT--VYQIGIWAEEKQRST 601
            A+ F S  + + IT+ D+ R + VN  F R+TGY  +EVVG+   ++  G    +  R  
Sbjct: 404  AQVFESGNEGMVITDGDN-RIITVNQAFTRITGYRPEEVVGQNPAIFSSGRHDADFYRQ- 461

Query: 602  LLAALKAKGRVHHQEMLGRNKRGEILTVEVSIEPITLN--ETACLLMTARDVSLLKNAEA 659
            +   L+  G     E+  R K G +    ++I  +     + +  +    D++  K AEA
Sbjct: 462  MWHQLRDTG-AWSGEIWNRRKDGSLYPEWLNISSVRDEGGQASHYIAAFSDITERKAAEA 520

Query: 660  QIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVG 719
            Q+RHLA +D LTNLPNR LL DRL Q IA  +R     ALLFLDLD FK+INDSLGH VG
Sbjct: 521  QVRHLAEYDALTNLPNRVLLQDRLGQAIAAARRAGSCLALLFLDLDRFKNINDSLGHTVG 580

Query: 720  DTVLKIITARLEASVRMEDTVARLGGDEFVVLLSGLEGTRNEVSEQVRELADTLRELLSE 779
            D VL  +  RL  +VR  DTV+RLGGDEFV+LL  LE        Q   +A+ L   L+ 
Sbjct: 581  DQVLCQVGERLLTAVRASDTVSRLGGDEFVLLLPQLESPA-----QAASVAEKLLLTLAT 635

Query: 780  PMFLDGQRLQVTPSIGVALIPDHGSTPTDLLKRADIALYRAKDSGRNATQMFHNTMQKAA 839
            P+ +D   L VTPSIG+A+ P+ G     LLK AD A+Y AK+SGRN  Q F   M    
Sbjct: 636  PLAIDDYELAVTPSIGIAVFPEDGEDGDTLLKNADAAMYVAKESGRNNYQYFTAAMNARV 695

Query: 840  SERLRMETDLRLALSRGEFSVQYQPQVDALDGRIIGAEALVRWRHPRLGEQSPSEFIKVL 899
            S+RL +E +LR AL+R E ++ YQPQ D   G ++G EAL+RWR P  G   P  FI V 
Sbjct: 696  SQRLLLENNLRQALARQELALHYQPQYDLHSGTLVGCEALLRWRQPEQGLIPPDRFIPVA 755

Query: 900  EDSGLILEVGAWILDETCQAFRQLIDRGLIDPLNFSLCVNISPRQFRQNDFVERIEQTLS 959
            E++GLIL +G W+L E C+  +   D GL  PL   + VNIS  QFRQ +    +++ L+
Sbjct: 756  EETGLILPIGQWVLREACRQAQAWQDAGL-PPL--VVAVNISAVQFRQANLAALVQEALA 812

Query: 960  SHGLPYSLLKLEVTEGIVIQNLDDTISKMRRLKKLGVSFAMDDFGTGYSSLTYLKRLPVD 1019
            + GL    L+LE+TE +++++ +     + +LK +G+  A+DDFGTGYSSL YLKR  +D
Sbjct: 813  ASGLSPCWLELELTESMLMEDGERHTQTLAQLKAMGIRLALDDFGTGYSSLAYLKRFSLD 872

Query: 1020 TLKIDQSFIRDATSDPNDAEIIRAIVAMARSLELTVIAEGVETTEQLDFLQGLGCHLYQG 1079
             LKID+SFIRD   D  DA I  AI+ MAR L L  +AEGVET +Q  FL   GC   QG
Sbjct: 873  KLKIDRSFIRDLPQDAEDAAITTAIIGMARDLGLETLAEGVETEQQWSFLAERGCAQMQG 932

Query: 1080 YLHSQPLPLEGFLKLL 1095
            +L ++P+P +    LL
Sbjct: 933  FLRARPMPADEITALL 948