Pairwise Alignments

Query, 1096 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2E3

Subject, 809 a.a., sensory box/GGDEF family protein from Marinobacter adhaerens HP15

 Score =  384 bits (986), Expect = e-110
 Identities = 227/573 (39%), Positives = 330/573 (57%), Gaps = 19/573 (3%)

Query: 525  DITQQQRSEAALKASEEKFAKAFHSSPDAITITERDSGRYLEVNDGFCRLTGYSADEVVG 584
            D+ +QQ+  A ++    KF+KA   SP ++ I +R   R    N  F +LTGY A  ++G
Sbjct: 240  DMERQQKDAAEIR----KFSKAIEQSPSSVLICDRQ-WRIEFANQKFTQLTGYEAASIIG 294

Query: 585  KTVYQIGIWAEEKQRST-LLAALKAKGR---VHHQEMLGRNKRGEILTVEVSIEPIT--L 638
            K    +G    E + S  L  +++ + +   V   E+    + GE    ++ + PI    
Sbjct: 295  KHPGALGDNDIENRDSRHLWQSIRLQVQRVGVWQGEVNSVRRNGERFWEQLIVTPIKDEA 354

Query: 639  NETACLLMTARDVSLLKNAEAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGA 698
              T   L+   D+S+ K  E Q+   A +D LT LPNR L +DRL   +A  +R +    
Sbjct: 355  GGTTGYLILGEDISIRKRYEQQLLRQANYDILTGLPNRMLALDRLKLALAQARRESTLVG 414

Query: 699  LLFLDLDHFKHINDSLGHPVGDTVLKIITARLEASVRMEDTVARLGGDEFVVLLSGLEGT 758
            ++FLDLD+FKHIND+LGH  GD +L     R+ + +R   TVARLGGDEF+V+L GL G 
Sbjct: 415  VMFLDLDNFKHINDTLGHDAGDNLLIEAARRISSCLRGTSTVARLGGDEFLVILPGLTGP 474

Query: 759  RNEVSEQVRELADTLRELLSEPMFLDGQRLQVTPSIGVALIPDHGSTPTDLLKRADIALY 818
              E S QV   A+ + +  S P  L+GQ + VT SIG+A+ P        LL+ AD A+Y
Sbjct: 475  --EASSQV---AERILKTFSPPYILNGQEVFVTTSIGIAIFPTDSDNSGTLLQHADAAMY 529

Query: 819  RAKDSGRNATQMFHNTMQKAASERLRMETDLRLALSRGEFSVQYQPQVDALDGRIIGAEA 878
            +AK  G+++   F   M + + ERL+ME+ +R AL   EF + +QP V+   G +   EA
Sbjct: 530  QAKHKGKSSFAHFAPEMTEVSHERLKMESSMRRALELKEFELYFQPIVNTDSGTLCSVEA 589

Query: 879  LVRWRHPRLGEQSPSEFIKVLEDSGLILEVGAWILDETCQAFRQLIDRGLIDPLNFSLCV 938
            L+RW +P +G   P  FI + E++GLI  +G W+L E C+A     +    D     + V
Sbjct: 590  LLRWNNPAMGMVMPDRFIPLAEETGLITPIGEWVLLEACRAAMGWKEATGKD---IGISV 646

Query: 939  NISPRQFRQNDFVERIEQTLSSHGLPYSLLKLEVTEGIVIQNLDDTISKMRRLKKLGVSF 998
            N+SPRQFR   F E +   L++ GL    L+LE+TE +++ N  +T   +R+L K G+  
Sbjct: 647  NVSPRQFRDPGFTEAVMHALATSGLAPEQLELEITERLILDNSIETAEILRQLDKAGIRL 706

Query: 999  AMDDFGTGYSSLTYLKRLPVDTLKIDQSFIRDATSDPNDAEIIRAIVAMARSLELTVIAE 1058
            ++DDFGTGYS+L+YLK  P DTLKID+SF++D   +P DA ++RAI+ MA SL L VIAE
Sbjct: 707  SVDDFGTGYSALSYLKSYPFDTLKIDKSFVQDVMKEPEDASLVRAIINMAHSLGLRVIAE 766

Query: 1059 GVETTEQLDFLQGLGCHLYQGYLHSQPLPLEGF 1091
            GVE   Q  FL+  GC   QGY +S+PLP   F
Sbjct: 767  GVEEEAQTHFLKKEGCDFSQGYFYSRPLPAADF 799



 Score = 28.5 bits (62), Expect = 0.002
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 152 QREQALSSSEKRFATLFHLCPNMVLLTRQEDGLISEANQYFESLFGWPVHSVIGRTTLEL 211
           +R+Q  ++  ++F+      P+ VL+  ++   I  ANQ F  L G+   S+IG+    L
Sbjct: 242 ERQQKDAAEIRKFSKAIEQSPSSVLICDRQ-WRIEFANQKFTQLTGYEAASIIGKHPGAL 300

Query: 212 G 212
           G
Sbjct: 301 G 301