Pairwise Alignments

Query, 619 a.a., peptidylprolyl isomerase from Pseudomonas fluorescens FW300-N2E3

Subject, 621 a.a., peptidyl-prolyl cis-trans isomerase D (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  360 bits (925), Expect = e-104
 Identities = 230/624 (36%), Positives = 345/624 (55%), Gaps = 17/624 (2%)

Query: 1   MLQNIRDNSQGWIAKTIIGVIVALMALTGFDAIFKATTHRNDAAKVNGEEISQNELSQAV 60
           ML+ IRD SQG IAK I+ +++   A  G  + +  +T    AA+VNG++I++ EL QA 
Sbjct: 1   MLEKIRDGSQGVIAKGILVLVILSFAFAGVSS-YLGSTSEVPAAEVNGDKITKAELEQAY 59

Query: 61  DMQRRQLMQQLGKDFDASLLDEKML---RDAALKGLIDRKLLLQGAEKSKFAFSEAALDQ 117
             +R ++ QQLG+ F A   DE+ L   + + L+ L+  KL+ Q A       S+  + +
Sbjct: 60  QSERARMEQQLGEMFAALSADERYLESIKQSVLERLVADKLIDQAAAAMGLRVSDEQIIE 119

Query: 118 VILQTPEFQVDGKFSPERFDQVIRQLGYSRMQFRQMLAQEMLIGQLRAGLAGSGFVTDAQ 177
            I   P FQ DGKF  ER+  ++RQLGY    FR M+  +M   QL A L G+ FV   +
Sbjct: 120 AIKSEPAFQTDGKFDNERYQAILRQLGYQPQTFRSMMRVDMTRRQLTAALVGTEFVLPGE 179

Query: 178 VQAFARLEKQTRDFATLNVKADP--AAVKLTDEEVKAYYDEHAKEFMTPDQVVIDYLELK 235
            +  A L+ QTRD   L V + P  A   +TDE+VK+YYD +  +FM+P++V ++Y+EL 
Sbjct: 180 AKQLAELQGQTRDIRYLVVDSAPFLAKASVTDEQVKSYYDANQGQFMSPEKVSLEYVELN 239

Query: 236 KASFFDQVAVKDEDLQALYQKETANLA--EQRRAAHILIEVNDKVNEAQAKAKIEEIQAR 293
            A F     V DE+ Q  Y +  A     E+R AAHILI +    +EA AKAK E++  +
Sbjct: 240 AADFAKDSKVTDEEAQTYYDEHKAQYVSNEKRLAAHILIALGS--DEAAAKAKAEDLAKQ 297

Query: 294 LAKGESFEALAKEFSQDPGSAANGGDLGYAGPGVYDPTFEKALYALGKDQVSAPVRTEFG 353
           L  G  F ALAK  S+D  SA  GG L +  PGV DPTF+ AL+AL K Q S  V+T+FG
Sbjct: 298 LDNGADFAALAKANSEDTLSAEQGGKLDWFEPGVMDPTFDTALFALQKGQHSGVVKTDFG 357

Query: 354 FHLIKLLGVEAPQVPSFASLKDKLTKELKTQQVEQRFVDATKQLEDAAFEASD-LAQPAA 412
           FH+IKLL ++      FA +K K+  +L+ ++   +F     +L D ++E  D LA+ A 
Sbjct: 358 FHIIKLLDIQPGTTVPFADVKTKIFAQLQEKKAVDQFYSLQSKLADTSYEVPDTLAETAK 417

Query: 413 DLKLTVHTSAPFGREGGEGIAANRAVVTAAFSPEVLDEGANSTGIELDPETVVVLRAKEH 472
            + + + T+  F R+          VV AAFS  V+ +G NS  IEL+P  VVV+R KEH
Sbjct: 418 VVGVEIKTTPLFSRDDVPAALNKPDVVKAAFSDPVMRQGLNSEVIELEPNHVVVIRMKEH 477

Query: 473 RKPEQLPLESVAASIRVQLTKEHASAAAKTKADELIASLRDGKTPLASQGWKVTNAATRA 532
                +PL  V A I  +L +E A+ AA+ KA+EL+A ++ G    A           R 
Sbjct: 478 HDAGTMPLAEVKADIAERLKQEQANEAARAKAEELMAQVKAG---AADVSLTAKTKLGRG 534

Query: 533 QEGVDPTVLQALFRMPKPAAKDKPTFSSVTLTDGSLVIVRLNGVSEAAAPSEEEKAQYRR 592
            + VD  ++   F+MP P+A   P   +V L +G   +V L+ V+ A + S+E     ++
Sbjct: 535 AQDVDAAIVGKAFQMPTPSA--APVVGTVGLANG-YAVVALDKVNAADSVSDELVNALKQ 591

Query: 593 FLASRVGQQDFAAYRKQLESQADI 616
            L ++  + D+    + L++ A +
Sbjct: 592 RLNAQYSEADYRGLIESLKANAKV 615