Pairwise Alignments

Query, 153 a.a., flagellar motor switch protein from Pseudomonas fluorescens FW300-N2E3

Subject, 127 a.a., flagellar motor switch protein (RefSeq) from Shewanella loihica PV-4

 Score =  146 bits (368), Expect = 1e-40
 Identities = 84/149 (56%), Positives = 103/149 (69%), Gaps = 22/149 (14%)

Query: 5   MNTQDDQALADEWAAALEETGDAGQDDIDALLAADAASSSSSSRLAMEEFGSVPKNHEPV 64
           M+T+D     D+WAAA+ E        ++   A +    + SS+   EE           
Sbjct: 1   MSTEDT---GDDWAAAMAEQA------LEEAQAVELDELADSSKPLTEE----------- 40

Query: 65  TLDGPNLDVILDIPVSISMEVGSTDINIRNLLQLNQGSVIELDRLAGEPLDVLVNGTLIA 124
             +   LD I+DIPV+ISMEVG + INIRNLLQLNQGSV+ELDR+AGEPLDV+VNGTLIA
Sbjct: 41  --EAAKLDTIMDIPVTISMEVGRSFINIRNLLQLNQGSVVELDRVAGEPLDVMVNGTLIA 98

Query: 125 HGEVVVVNEKFGIRLTDVISPSERIKKLR 153
           HGEVVVVN+KFGIRLTDVIS +ERIKKL+
Sbjct: 99  HGEVVVVNDKFGIRLTDVISQTERIKKLK 127