Pairwise Alignments

Query, 432 a.a., mechanosensitive ion channel protein MscS from Pseudomonas fluorescens FW300-N2E3

Subject, 439 a.a., Small-conductance mechanosensitive channel from Pseudomonas stutzeri RCH2

 Score =  396 bits (1017), Expect = e-115
 Identities = 204/405 (50%), Positives = 275/405 (67%), Gaps = 6/405 (1%)

Query: 10  TQDLWGALD---QHPLLHSSLALMVLLVIALLLGRVARYVVLHAVKLLGRQPAMQWFNDL 66
           + DL G LD    H  L + LA   L+  A L   V + +++  +  L +        D 
Sbjct: 2   SDDLAGWLDWLRAHAELQTLLASATLIFAAWLSNWVVKRILVRGLYRLLQHTRENKLQDF 61

Query: 67  FQNKVFHRLAQMTPSLVIQFGLNLVPELSKTIQNFLGNVALSFTILFLVLALSALLNAML 126
               V  RL+ + P+LV+  G+  VP L +     + NV   F +L + LAL A+L+ + 
Sbjct: 62  ---GVIKRLSNIVPALVLSIGVTTVPGLPEAAVTVVQNVCGGFIVLTIALALGAVLDIVN 118

Query: 127 DIYARTEHARTRSIKGYVQLAKMVLFVFGAIIIVATLIDRSPLLLLSGLGAMSAVILLVY 186
            IY R   +R   IKGY+Q+ K+V++    I+I+ATLIDRSPL+LLSGLGAM+AV++L++
Sbjct: 119 LIYQRRPDSRLHPIKGYLQVVKIVVYAIATILIIATLIDRSPLILLSGLGAMAAVLMLIF 178

Query: 187 KDTLLSFVASVQLTSNDMLRVGDWIEMPQVGADGDVVDITLHTVKVQNFDKTIVSIPTWR 246
           +DTLLS VASVQ+TSND++RVGDW+EMPQ+ ADGDV+DI LHTVK+QN+DKTI SIPT R
Sbjct: 179 QDTLLSLVASVQITSNDLIRVGDWVEMPQLNADGDVIDIALHTVKIQNWDKTITSIPTKR 238

Query: 247 LMSESFKNWRGMQQSGGRRIKRSLFIDASGVRFIHDDEEQKLTQVRLLTDYISRKQAELK 306
            +S+SFKNWRGMQ+SGGRRIKRSL++D   V F+  +E ++L +  LL +Y++ K  E++
Sbjct: 239 FISDSFKNWRGMQESGGRRIKRSLYLDQQSVHFLSREECERLHRFNLLDEYLTEKTREIE 298

Query: 307 SWNEAQGNVAAMSANRRRMTNIGTFRAYALAYLKSHPEIQPNMTCMVRQMQTTAQGVPLE 366
           +WN           N RR+TNIG+FRAY   YL+SH  I  NMT +VRQ+  TA G+PLE
Sbjct: 299 AWNAKLEERGKEPVNTRRITNIGSFRAYVERYLRSHGGIHQNMTLIVRQLSPTADGLPLE 358

Query: 367 IYCFTRTTAWADYERIQGDIFDYLLAVLPEFGLSLYQQPSGGDLR 411
           IYCFT T AW  YE IQ DIFD+LLA+LPEFGL ++Q PSG D+R
Sbjct: 359 IYCFTNTVAWTQYEAIQSDIFDHLLAILPEFGLRVFQHPSGADIR 403