Pairwise Alignments

Query, 432 a.a., mechanosensitive ion channel protein MscS from Pseudomonas fluorescens FW300-N2E3

Subject, 412 a.a., mechanosensitive ion channel family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  342 bits (876), Expect = 2e-98
 Identities = 178/407 (43%), Positives = 264/407 (64%), Gaps = 4/407 (0%)

Query: 6   LWLNTQDLWGALDQHPLLHSSLALMVLLVIALLLGRVARYVVLHAVKLLGRQPAMQWFND 65
           LWL   D+    +   ++  + AL ++  I++ +  V    VL  +K         W N 
Sbjct: 7   LWLQKFDI----EIERVIQLAEALGLIAAISIAIHLVLHRGVLLWLKRHTHHEQSVWRNA 62

Query: 66  LFQNKVFHRLAQMTPSLVIQFGLNLVPELSKTIQNFLGNVALSFTILFLVLALSALLNAM 125
           LF+  +F R+A +   +VI     L    +    + L  +   + ++F +LA  ++LN +
Sbjct: 63  LFKEHLFSRVALLIQGVVIAVQTQLWLSPNTFAYDVLHTLTSLWIVVFGMLATYSVLNVL 122

Query: 126 LDIYARTEHARTRSIKGYVQLAKMVLFVFGAIIIVATLIDRSPLLLLSGLGAMSAVILLV 185
             + +RT+  +    +G +Q  K+++F+  A+   + LI +SP++LLSGLGAM+AV +LV
Sbjct: 123 ELLISRTQVGKNLPTRGILQSIKLIVFIIAALFFTSILIGKSPVILLSGLGAMTAVFMLV 182

Query: 186 YKDTLLSFVASVQLTSNDMLRVGDWIEMPQVGADGDVVDITLHTVKVQNFDKTIVSIPTW 245
           +KD +L  VA VQL++N ML VGDW+EMP+ GADG V+DI+L TVKVQN+DKTI +IP++
Sbjct: 183 FKDPILGLVAGVQLSANKMLSVGDWLEMPKYGADGSVIDISLTTVKVQNWDKTITTIPSY 242

Query: 246 RLMSESFKNWRGMQQSGGRRIKRSLFIDASGVRFIHDDEEQKLTQVRLLTDYISRKQAEL 305
            L+S+SFKNW+GMQ+SGGRRIKRS+ IDA+ V F+ ++E+Q L + +LL  Y+  K+ E+
Sbjct: 243 ALISDSFKNWKGMQESGGRRIKRSILIDATSVHFLTEEEKQALKKAQLLEPYLVEKEQEI 302

Query: 306 KSWNEAQGNVAAMSANRRRMTNIGTFRAYALAYLKSHPEIQPNMTCMVRQMQTTAQGVPL 365
            S+N+ +    A   N RR+TNIG+FRAY   YL++HP I  +MT MVRQ+  T  G+ L
Sbjct: 303 SSYNQQKHWDLACRINGRRLTNIGSFRAYLERYLRTHPNIHQDMTLMVRQLAPTHDGISL 362

Query: 366 EIYCFTRTTAWADYERIQGDIFDYLLAVLPEFGLSLYQQPSGGDLRA 412
           E+YCFT TT W +YERIQ DIFD++ AVLPEF L + Q P+G D RA
Sbjct: 363 EVYCFTSTTVWVEYERIQSDIFDHIYAVLPEFDLRVSQAPTGNDFRA 409