Pairwise Alignments

Query, 432 a.a., mechanosensitive ion channel protein MscS from Pseudomonas fluorescens FW300-N2E3

Subject, 274 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score = 47.0 bits (110), Expect = 7e-10
 Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 26/187 (13%)

Query: 77  QMTPSLVIQFGLNLV-PELSKTIQNFLGNVALSFTILFLVLALSALLNAMLDIYARTEHA 135
           +  P L++ +GL +V   +   I  +L NVA   T        + L+N         +  
Sbjct: 9   EQAPELILTYGLQVVFAIIIFIIGKYLANVAKKLT--------TKLMN---------KRK 51

Query: 136 RTRSIKGYV-QLAKMVLFVFGAIIIVATL--IDRSPLLLLSGLGAMSAVILLVYKDTLLS 192
             +++  +V  +A  ++FVF    ++ATL  I      L++ +GA    + L  + +L +
Sbjct: 52  IDKTVVSFVANMAWALVFVF---TVIATLGQIGVQTASLVAVIGAAGLAVGLALQGSLSN 108

Query: 193 FVASVQLTSNDMLRVGDWIEMPQVGADGDVVDITLHTVKVQNFDKTIVSIPTWRLMSESF 252
           F + V +      RVGD+IE    G  G V +IT+ + K++  D  ++  P   +M+ + 
Sbjct: 109 FASGVLMVLFRPCRVGDYIE--AAGIAGTVDEITIFSTKLRTPDNKVIVAPNSSIMNGTI 166

Query: 253 KNWRGMQ 259
            N+  M+
Sbjct: 167 TNYSAME 173