Pairwise Alignments

Query, 432 a.a., mechanosensitive ion channel protein MscS from Pseudomonas fluorescens FW300-N2E3

Subject, 388 a.a., MscS mechanosensitive ion channel from Marinobacter adhaerens HP15

 Score = 49.7 bits (117), Expect = 2e-10
 Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 25/263 (9%)

Query: 3   LKQLWLNTQDLWGALDQHPLLHSSLALMVL---LVIALLLGR-VARYVVLHAVKLLGRQP 58
           ++QL  N  D + A+    L   +L + +L   LV  + LG  +  Y++L A   LG   
Sbjct: 19  IEQLRRNLGDAFQAVSGENLDWGALLVQILGQLLVSVIYLGVFLGVYLILIAAIRLGLGE 78

Query: 59  AMQWFNDLFQNKVFHRLAQMTPSLVI---QFGLNLVPELSKTIQNFLGNVALSFTILFLV 115
                    Q +   R      +LV+   QFG++  PE+ K +    G + L F ++++V
Sbjct: 79  RRTKTPLYIQMRSGLRYLAGLGALVVILAQFGVS--PEVLKAMAR-AGFMVLGFYVVWVV 135

Query: 116 LALSALLNAMLDIYARTEHARTRSIKGYVQLAKMVLFVFGAIIIVATLIDR---SPLLLL 172
                          +   +R R      QL + +  V  A + V T++ +     + ++
Sbjct: 136 FRR----------LIKEGTSRYRMDPSIRQLVENLFAVIAATLAVVTVLAQFGFDVVSII 185

Query: 173 SGLGAMSAVILLVYKDTLLSFVASVQLTSNDMLRVGDWIEMPQVGADGDVVDITLHTVKV 232
           +GLG +   +    + TL +F+A + L      R+GDW+ +   G +G VV I L T  +
Sbjct: 186 AGLGIVGIAVGFAAQSTLSNFIAGITLLIERPFRIGDWVTIN--GQEGKVVKIALRTTWL 243

Query: 233 QNFDKTIVSIPTWRLMSESFKNW 255
           +  D     IP   + S    N+
Sbjct: 244 RTRDNIFTMIPNDSVASTDIINY 266