Pairwise Alignments

Query, 432 a.a., mechanosensitive ion channel protein MscS from Pseudomonas fluorescens FW300-N2E3

Subject, 407 a.a., small-conductance mechanosensitive channel from Marinobacter adhaerens HP15

 Score = 58.9 bits (141), Expect = 3e-13
 Identities = 70/381 (18%), Positives = 149/381 (39%), Gaps = 72/381 (18%)

Query: 32  LLVIALLLGRVA-RYVVLHAVKLLGRQPAMQWFNDLFQNKVFHRLAQMTPSLVIQFGLNL 90
           ++V AL+ G     Y+  H +  L R+ +     +LF + + H   +   + V   G+  
Sbjct: 27  IVVFALVFGTATVAYIASHIIAALERKFSQT--KNLFDDALLHAARKPVVAFVWLQGVYW 84

Query: 91  VPELSKTIQN---FLGN-----VALSFTILFLVLAL----SALLNAMLDIYARTEHARTR 138
             E++        F  N     +   F +++ VL L      +L + L +    ++    
Sbjct: 85  AAEVAHKYSEAEIFKANESVLQIGFIFVLVWAVLRLIKEAEGILVSPLKMKQPMDYTTVN 144

Query: 139 SIKGYVQLAKMVLFVFGAIIIVATL-IDRSPLLLLSGLGAMSAVILLVYKDTLLSFVASV 197
           ++    +L++ V+ +   +I + ++    S +L   G+G ++  +    KD L +F    
Sbjct: 145 AVS---KLSRAVVLITAVLIAMQSMGYSISGVLAFGGVGGIA--VGFAAKDLLANFFGGF 199

Query: 198 QLTSNDMLRVGDWIEMPQVGADGDVVDITLHTVKVQNFDKTIVSIPTWRLMSESFKNWRG 257
            +  +   +VGDW+  P    +G V  I      ++ FDK  + +P     + + +N   
Sbjct: 200 IIHLDRPFKVGDWVRSPDRNIEGTVEHIGWRLTTIRTFDKRPLYVPNAAFTTIAVEN--- 256

Query: 258 MQQSGGRRIKRSLFIDASGVRFIHDDEEQKLTQVRLLTDYISRKQAELKSWNEAQGNVAA 317
             +   RRI  ++     G+R+        + Q+  + D I                   
Sbjct: 257 PSRMSNRRIYETI-----GIRY------ADVAQMATIVDDIR------------------ 287

Query: 318 MSANRRRMTNIGTFRAYALAYLKSHPEIQPNMTCMVRQMQTTAQGVPLEIYCFTRTTAWA 377
                              A L+ H +I+ + T +V  +   A  + + +YCFT+TT W 
Sbjct: 288 -------------------AMLQQHEDIESDETLIVNFLAFNASSLDIMVYCFTKTTQWV 328

Query: 378 DYERIQGDIFDYLLAVLPEFG 398
            +  ++ D+   +  ++  +G
Sbjct: 329 PFHEVKQDVLLKISDIIEGYG 349