Pairwise Alignments

Query, 432 a.a., mechanosensitive ion channel protein MscS from Pseudomonas fluorescens FW300-N2E3

Subject, 443 a.a., putative membrane transport protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  343 bits (881), Expect = 5e-99
 Identities = 165/387 (42%), Positives = 266/387 (68%), Gaps = 2/387 (0%)

Query: 27  LALMVLLVIALLLGRVARYVVLHAVKLLGRQPAMQWFNDLFQNKVFHRLAQMTPSLVIQF 86
           + L+ ++ IALL   + R ++L  V  L +Q    W + +F +KV   +++M   ++I  
Sbjct: 49  IVLLFIIGIALLANIICRKIILRVVAKLVKQTKATWDDIVFNHKVMVNVSRMVAPILIYI 108

Query: 87  GLNLV-PELSKT-IQNFLGNVALSFTILFLVLALSALLNAMLDIYARTEHARTRSIKGYV 144
            + +  PE + + + +FL  + L + I   +  +SAL  A+  +Y+  E  R + +KG +
Sbjct: 109 AIPIAFPEHADSDLLDFLRRLCLIYIIAVFLRFISALFTAVYQVYSEREQYRDKPLKGLL 168

Query: 145 QLAKMVLFVFGAIIIVATLIDRSPLLLLSGLGAMSAVILLVYKDTLLSFVASVQLTSNDM 204
           Q A+++LF  GAIII++ LI++SP++LL+GLGA +A+++LV+KD+++ FV+ +QL++N+M
Sbjct: 169 QTAQVILFFIGAIIIISILINQSPMVLLTGLGASAAILMLVFKDSIMGFVSGIQLSANNM 228

Query: 205 LRVGDWIEMPQVGADGDVVDITLHTVKVQNFDKTIVSIPTWRLMSESFKNWRGMQQSGGR 264
           L+VGDWI MP+ GADG V+++TL+TVKV+NFD TI +IP + L+S+SF+NW+GMQ+SGGR
Sbjct: 229 LKVGDWITMPKYGADGTVIEVTLNTVKVRNFDNTITTIPPYLLISDSFQNWQGMQESGGR 288

Query: 265 RIKRSLFIDASGVRFIHDDEEQKLTQVRLLTDYISRKQAELKSWNEAQGNVAAMSANRRR 324
           R+KRS+ ID + VRF   +  +K  +++LL +Y+   +  ++ +N+      ++  N RR
Sbjct: 289 RVKRSINIDMTSVRFCTPEMLEKYRKIQLLANYVDETEKVVEEYNKEHDIDNSVLVNGRR 348

Query: 325 MTNIGTFRAYALAYLKSHPEIQPNMTCMVRQMQTTAQGVPLEIYCFTRTTAWADYERIQG 384
            TN+G FRAY   YL+S P +  +MTCMVRQ+Q T  G+PLE+Y F+    W  YE IQ 
Sbjct: 349 QTNLGVFRAYLTNYLRSLPTVNQDMTCMVRQLQPTETGIPLELYFFSANKVWVAYEGIQA 408

Query: 385 DIFDYLLAVLPEFGLSLYQQPSGGDLR 411
           D+FD++LA++PEFGL ++Q PSG DLR
Sbjct: 409 DVFDHVLAIIPEFGLRVFQNPSGEDLR 435