Pairwise Alignments

Query, 1072 a.a., chemotaxis protein CheY from Pseudomonas fluorescens FW300-N2E3

Subject, 1042 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  228 bits (580), Expect = 2e-63
 Identities = 202/646 (31%), Positives = 306/646 (47%), Gaps = 57/646 (8%)

Query: 472  ALEQALRAADSANEAKTRFLATMSHEIRTPLYGVLGTLELLGLTDLGPRQQEYLRTIQRS 531
            AL +A   A+ A + K  FLA MSHEIRTP+ GV+G L LLG T L P Q+ Y+     S
Sbjct: 393  ALSEAREKAEVAAKTKEDFLACMSHEIRTPMNGVIGILGLLGETQLSPMQKRYVDVASAS 452

Query: 532  SATLFQLISDVLDVSKIESGQMTIEAQDFCPLELTEDTLCAYSAFAEAKGLQLYACIDSA 591
            + +L  L++D+LD SKIESG+  IEA +F  +EL +  + + S   E + L L+  I   
Sbjct: 453  ADSLLSLLNDILDFSKIESGKFEIEAIEFDLVELLDLFVQSVSLKLEERHLPLFVDITQL 512

Query: 592  IPDRVQGDPLRIRQILNNLLSNAIKFTDNGRVVLRLRLLDLNAGGANLQWQVSDSGIGIS 651
                V GDP R+RQIL NL+ NAIKFT+ G + LRL      +G   L  +V D+GIGI+
Sbjct: 513  QYRYVVGDPSRLRQILVNLVGNAIKFTEEGWIALRLSNRLSESGEVLLSCEVEDTGIGIA 572

Query: 652  QAQQSQLFDPFYQVRDASSE--AGAGLGLAICWWLCELMAGQLKVVSEPGLGS--SFSLQ 707
            + + + LF+PF QV  +++    G GLGL+I   LCELM G++KV S+  +GS  SF+L 
Sbjct: 573  KEKLAMLFNPFIQVDSSTTRMFGGTGLGLSIAKRLCELMQGEIKVRSQQEVGSIFSFTLT 632

Query: 708  LHLACAVGQLSDCPEFAPDAPPIYVQAPAPE--LAQHVCNWFNR---LGQETRILGPDAK 762
              LA +   +      +P+   +  Q  A E  L + + +W  R   L +E  IL  D  
Sbjct: 633  QQLADSDKMIDWRAGLSPERVTLMGQLGAFERMLGELLTSWGARVSYLEEEDAILETDV- 691

Query: 763  NLPGSSALLLDVLPSSQTAW----------GGPRVIATTAGANPAEYTAEGWSVD----A 808
             +  S A   +       AW             RV+   +     E+  +   V      
Sbjct: 692  -IIYSFAPRREAFVEELNAWRELVGQHADRPNTRVLPLLSYWQQTEFEKQDARVPHLGRP 750

Query: 809  HDIRAMAWAVS-FAQQGVGQRNHTALTEQARRLDLNILIAEDNPINRAIIKEQLEALGCT 867
             +IR +  A+S  A + + +     + E +      +L+ EDN +N+ +    L  LG  
Sbjct: 751  LNIRQLIRALSDRADEEMIEPVIEPIVEPSMPDKPKVLLVEDNKVNQMVALGMLHQLGVQ 810

Query: 868  VVATADGEQALHQWLPGL----FDMVLTDVNMPVMNGYELTKALRRNDAD-----LPIIG 918
                ++G +AL   L  L    + ++L D  MP M+G++ T A+R          LPII 
Sbjct: 811  ADVASNGREAL-ALLSALQGNPYQLILMDCLMPEMDGFQATAAIREGQGGSQFCALPIIA 869

Query: 919  VTANALRDEGERCAAVGMNAWLVKPLNLHTLRTQL--------------LKHCKAANPLP 964
            +TANA++ + E C   GM+ +L KPL L  L+  L              L H      LP
Sbjct: 870  LTANAMKGDREHCIRAGMDDYLTKPLVLSVLKECLYRWFSLSQQNYEAALGHDPDVETLP 929

Query: 965  L-VEP-----DQPAHIAQIPDQPQLSPKMRTLFFSTMQQDIDKVTASLRDSDAAALGRHL 1018
              +E      D+ + +A +     L  ++  +F   MQ         +  +D  A+   +
Sbjct: 930  TPIEAESQLFDRDSALALMSGDEALLDEVLQVFVEEMQDHRKAFIEGIAAADCTAIRSSV 989

Query: 1019 HSMAGALGAVQAGSLADACISLESRLEGHPLTPALATEVSALLERL 1064
            H++ GA   +   +L +    LE+      L   LA    A LE L
Sbjct: 990  HAIKGAASNLSMTALVELARQLEADARRGDLQAVLAGR-EAFLELL 1034