Pairwise Alignments

Query, 377 a.a., ribonuclease D from Pseudomonas fluorescens FW300-N2E3

Subject, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

 Score =  219 bits (558), Expect = 1e-61
 Identities = 128/371 (34%), Positives = 202/371 (54%), Gaps = 7/371 (1%)

Query: 1   VAIDIHWIRDNDSLGQFCAQWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGERAFLIDPL 60
           ++++   I     L + C   +    V LDTEF+R  TF+P  GL+Q+ DGE   LIDP 
Sbjct: 7   LSVNYQIISQVGDLQRVCLAARDADVVMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPT 66

Query: 61  TIDNWQPLAQLLENPAVVKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNLGFSMGY 120
            +D   P  +LL++ +V+KVLHAC EDLEV     G  P P+ DTQ+ AA+L  G S G+
Sbjct: 67  VLDEMTPFVELLQDTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGF 126

Query: 121 SRLVSEVLGIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVHLRPKLSDEKYAW- 179
           + LV + L ++L K E+R+DWL RPLS+ Q+ YAA D  +L  ++  L  +++   + W 
Sbjct: 127 AALVQDQLQVELDKSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQVTQAGW-WD 185

Query: 180 -VLEDGAELVANLRREVDPYEVYREAKLAWKLSRAQLAVLRELCAWREHEARARDLPRNR 238
             L++    VA   +  +P   Y + K AW+L   +LA+L+ L  WR HEA  RDL  N 
Sbjct: 186 AALQESELQVAKRTKVSNPELAYLDIKGAWQLKPKELAILKPLATWRYHEAVNRDLALNF 245

Query: 239 IVREHSLWPLARTQPDNLGALAKIEDMHPRTVRQDGEFLLGLIKQAGSVPPDQWPPAVPE 298
           +++E  L  ++R    +   + + E + P  +R+    ++ ++K A   P D +PP +  
Sbjct: 246 VIKETDLLTISRLALRSPKRMEE-EGVDPHAIRRHSSKIIAMVKTALETPADAYPPEIVP 304

Query: 299 PLPVEA-AALVKRLRALGQAEAERLNIAPELMLRKKTLEALLKSGF--PEGPYQLPDSLR 355
            +       L KRL+   ++ +    +A E +  KK L  LL   +     P +LPD ++
Sbjct: 305 IMEYPGYKQLFKRLKDEVKSVSNTSGLATEFLASKKQLNQLLSWVWKRDRDPARLPDLMQ 364

Query: 356 GWRRELMGQAL 366
           GWR  L+G+ L
Sbjct: 365 GWRLPLLGEKL 375