Pairwise Alignments

Query, 377 a.a., ribonuclease D from Pseudomonas fluorescens FW300-N2E3

Subject, 383 a.a., ribonuclease D protein from Sinorhizobium meliloti 1021

 Score =  191 bits (486), Expect = 2e-53
 Identities = 114/364 (31%), Positives = 200/364 (54%), Gaps = 9/364 (2%)

Query: 8   IRDNDSLGQFCAQWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGERAFLIDPLTID-NWQ 66
           I+    L   C +  +  ++ +DTEF+R  TF+P+  L+Q+   E A ++DP+    +  
Sbjct: 2   IQTTADLEAACRELARSSYITIDTEFLRETTFWPVLCLIQMASPEMAVIVDPMAPGIDLA 61

Query: 67  PLAQLLENPAVVKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNLGFSMGYSRLVSE 126
           P   L+ NP VVKV HA  +D+E++  L   +P P+FDTQ+AA     G S+ Y +LV+ 
Sbjct: 62  PFFALMSNPDVVKVFHAARQDIEIIHHLGNLIPHPIFDTQVAAMVCGFGDSVSYDQLVNR 121

Query: 127 VLGIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVHLRPKLSDE-KYAWVLEDGA 185
           +    + K    +DW +RPL++ Q+ YA  D  HL +++ +L  +L  E + +W+ E+ A
Sbjct: 122 IKNEQIDKSSRFTDWSRRPLTDKQLDYALADVTHLRDIYQYLTKELDREGRSSWLAEEMA 181

Query: 186 ELVANLRREVDPYEVYREAKLAWKLSRAQLAVLRELCAWREHEARARDLPRNRIVREHSL 245
            L +    ++ P   ++  K+  K    +LAVL+++ AWRE EARAR++PR RI+++ ++
Sbjct: 182 ILESRETYDLHPDNAWQRLKMRVK-KPIELAVLQKVAAWREREARARNVPRGRIIKDDAI 240

Query: 246 WPLARTQPDNLGALAKIEDMHPRTVRQD-GEFLLGLIKQAGSVPPDQWPPAVPE-PLPVE 303
           + +A+ QP +  AL ++  +     R   G  L+  + +A ++P  + P    +   P  
Sbjct: 241 YEIAQQQPKDAEALGRLRTIPKGWERSSAGTALIEAVGEALAIPRGELPRLPRQNHAPEG 300

Query: 304 AAALVKRLRALGQAEAERLNIAPELMLRKKTLEALLKSGFPEGPYQLPDSLRGWRRELMG 363
           AAA  + L+ L +  +E+  +A +++     L+ +   G  EG      +L+GWRREL G
Sbjct: 301 AAAASELLKVLLKLISEKEGVAAKIIANSDDLDRIAAEG--EGADVA--ALKGWRRELFG 356

Query: 364 QALL 367
              L
Sbjct: 357 MTAL 360