Pairwise Alignments

Query, 377 a.a., ribonuclease D from Pseudomonas fluorescens FW300-N2E3

Subject, 386 a.a., Ribonuclease D (NCBI) from Rhodospirillum rubrum S1H

 Score =  190 bits (482), Expect = 7e-53
 Identities = 122/364 (33%), Positives = 189/364 (51%), Gaps = 10/364 (2%)

Query: 8   IRDNDSLGQFCAQWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGERAFLIDPLTID-NWQ 66
           I     L  FCA+     FV +DTEFMR  T++P   L+Q+     A  +DPL  D +  
Sbjct: 4   ISTTKDLADFCARLSTESFVTVDTEFMREKTYWPKLCLIQLAGTTEAHCVDPLAPDIDMA 63

Query: 67  PLAQLLENPAVVKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNLGFSMGYSRLVSE 126
           PL  L+ N +V+KV HA  +DLE+ L  +G LP P+FDTQ+AA     G S+GY  LV++
Sbjct: 64  PLFALMANESVLKVFHAARQDLEIFLHESGHLPKPIFDTQVAAMVCGFGDSVGYETLVAK 123

Query: 127 VLGIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVHLRPKL-SDEKYAWVLEDGA 185
           +    + K    +DW +RPL++ Q+ YAA D  HL  V+  L   L ++ + AW+ ++ A
Sbjct: 124 LAKARIDKSMRFTDWARRPLNDRQLVYAAGDVTHLRVVYERLAETLAANGRTAWLDQEMA 183

Query: 186 ELVANLRREVDPYEVYREAKLAWKLSRAQLAVLRELCAWREHEARARDLPRNRIVREHSL 245
            L       V+P + +   K   + +R  LA+L+EL AWRE  A+ RDLPRNR++R+  L
Sbjct: 184 ILTDPAHYRVEPEDAWMRIKARSRSARF-LALLQELAAWRERTAQERDLPRNRVMRDEGL 242

Query: 246 WPLARTQPDNLGALAKIEDMHPRTVRQD-GEFLLGLIKQAGSVPPDQWP-PAVPEPLPVE 303
             +A + P    AL+++  +         G  +L  ++ A ++P    P P   E LP  
Sbjct: 243 LEIAASAPTTPDALSQLRSVSKGMAEGTMGLGILEAVRLAQAIPEKALPHPPDREDLPQG 302

Query: 304 AAALVKRLRALGQAEAERLNIAPELMLRKKTLEALLKSGFPEGPYQLPDSLRGWRRELMG 363
              +V  L+ L + + E   +A +L+     LE +      +       ++ GWRR L G
Sbjct: 303 LGPVVDLLKVLLKMKCEEAGVAQKLVANMNDLERIAADDNAD-----VLAMEGWRRALFG 357

Query: 364 QALL 367
           +  L
Sbjct: 358 EDAL 361