Pairwise Alignments

Query, 377 a.a., ribonuclease D from Pseudomonas fluorescens FW300-N2E3

Subject, 368 a.a., ribonuclease D (RefSeq) from Shewanella loihica PV-4

 Score =  213 bits (543), Expect = 5e-60
 Identities = 127/365 (34%), Positives = 200/365 (54%), Gaps = 7/365 (1%)

Query: 7   WIRDNDSLGQFCAQWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGERAFLIDPLTIDNWQ 66
           ++ D+ SL +   +++Q   + LDTEF+R  T+Y   GL+Q+ DGE   LIDP+ + +  
Sbjct: 5   YVEDDASLTELVDKYRQAKVLMLDTEFVRTRTYYAKLGLIQVYDGETLALIDPVAVSDLS 64

Query: 67  PLAQLLENPAVVKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNLGFSMGYSRLVSE 126
               LLE   ++ VLH+CSEDLEVL R     P  LFD+Q+AAA+   G  MGY++LV  
Sbjct: 65  AFWALLERDDMISVLHSCSEDLEVLARYGRCQPKVLFDSQIAAAFCGWGHGMGYAKLVEH 124

Query: 127 VLGIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVHLRPKLSDE-KYAWVLEDGA 185
            LG+ L KGE+R+DW++RPLS+ Q+ YAA D  +L  ++  L  KL +  +  W+LE+G 
Sbjct: 125 CLGVQLDKGESRTDWMKRPLSDAQLQYAANDVDYLYRLYPQLLEKLQESGRMPWLLEEGE 184

Query: 186 ELVANLRREVDPYEVYREAKLAWKLSRAQLAVLRELCAWREHEARARDLPRNRIVREHSL 245
            +        D    Y + K A++LS  QLA L+ L  WR  +A  RDL    ++++H+L
Sbjct: 185 RMTQGRLESPDGDTAYLKVKNAFQLSPKQLAYLKVLAKWRLQKALDRDLALGFVIKDHAL 244

Query: 246 WPLARTQPDNLGALAKIEDMHPRTVRQDGEFLLGLIKQAGSVPPDQWPPAVP--EPLPVE 303
             LA+ QP + G + ++ ++  +  R   +    +I +      D  P A+      P  
Sbjct: 245 LALAKKQPKSTGEIFRMTELTEQEKRLHAK---AIIAEMAKADLDNLPEAIDVIALKPGY 301

Query: 304 AAALVKRLRALGQAEAERLNIAPELMLRKKTLEALLKSGFPEGPYQLPDSLRGWRRELMG 363
            +A     +AL Q  AE   +  EL+  K+ +   L+  + +G  ++P  L+GWR EL  
Sbjct: 302 KSAFKAIKQALTQV-AETHQVPMELLGSKRHIHEYLQWRWNDGQGEMPLVLQGWRGELSK 360

Query: 364 QALLD 368
            AL +
Sbjct: 361 DALAE 365