Pairwise Alignments

Query, 307 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

Subject, 301 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  103 bits (256), Expect = 6e-27
 Identities = 83/301 (27%), Positives = 145/301 (48%), Gaps = 7/301 (2%)

Query: 4   RISLDQWQAFVSTVECGGFQQAGEYMFKSQSAVSHSVNRMETLLGQELFLIEGRKAVLTP 63
           +I ++ ++     VE G F +A E + K+QSAVS+ V ++E  LG +LF  +  +A LTP
Sbjct: 2   KIDVEAFRVLSILVEEGSFSKAAERLHKAQSAVSYQVKKLEQHLGVKLFCRDQYRAELTP 61

Query: 64  LGQALLPQAKHLLGSAKKLERLAIQYQPGLCIEHSLAVDMLFPANVLEQALSRFSSVLQG 123
            G+ +L + K LL     +E LA ++  G   +  L VD   P   + +AL R S     
Sbjct: 62  EGKVILAEGKRLLQYLGNIEHLASRFSEGWEPKLELVVDGSLPMEPIMRALKRVSEHKIP 121

Query: 124 YHVRLHETAVSGAYELLENGKVELGIASSLPEG--YMQEFLLNVSLLCVVASDHSLAHFN 181
             ++L+   + G     E    +L +      G  Y  + L +++ + VV+  H LA   
Sbjct: 122 TKIQLNMEFLGGVQHRFERDNADLMLVKDYRTGPNYRPQPLPDINSILVVSRSHPLAKAK 181

Query: 182 GELNLADMKDYRQIVVSDSAIRNSQNSSWS-GASQCWTVSNLSTALTFVERGLGFAWLPE 240
            EL+L ++  + ++ + DS+     +     G  + + +S        +  GLGF W+P+
Sbjct: 182 -ELSLFELLQHVELTIEDSSPGKIHSDELQFGGDKVFYLSGFIMKKNALLMGLGFGWMPD 240

Query: 241 HMVSDKLASGQLR-LVPLCHQRECNVPMYMGFLEEYRFNPEVRLMTDIIREQCRNINSAK 299
            ++ ++LASG+L+ L  L   R    P  +  +E        RL T +I E+  N+  A+
Sbjct: 241 FLIQEELASGELQELDFLGGSRYSFTPQLVSTMER-PLGRAGRLFTSLILEEF-NLYQAQ 298

Query: 300 A 300
           A
Sbjct: 299 A 299