Pairwise Alignments

Query, 232 a.a., tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA from Pseudomonas fluorescens FW300-N2E3

Subject, 244 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  197 bits (501), Expect = 2e-55
 Identities = 115/240 (47%), Positives = 153/240 (63%), Gaps = 11/240 (4%)

Query: 2   TYSVSPIGFVRSCFKEKFAIPRQPQLAPAARGILELVAPFDQGDAVQGLEQVSHVWLLFL 61
           T  ++ +   R+ +K+KF IPRQP L  A RG +EL    +  DAV+G+EQ SH+WLLF 
Sbjct: 4   TNQITAVATCRTPYKQKFGIPRQPGLVKA-RGYVELEGHVNHLDAVRGIEQYSHLWLLFC 62

Query: 62  FHQALEDKPRLKVRPPRLGGNKSMGVFATRATHRPNGIGQSVVKLDKVEANR----LWIS 117
           FH+ L    +  VRPPRLGGN+ +GVFATR+T RPNGIGQSVVKL  V   +    L IS
Sbjct: 63  FHENLAQGWKTTVRPPRLGGNEKLGVFATRSTFRPNGIGQSVVKLHGVVQRKGKVCLEIS 122

Query: 118 GIDLLDGTPILDIKPYVPYADIIPGASNEIASAAPQLIPVLWADSALQQAHTHA-QRLEE 176
           G+DL+DGTPI+DIKPY+P++D I GA   +A  AP+LI V ++D A +Q +T++ Q    
Sbjct: 123 GMDLVDGTPIIDIKPYIPFSDSIEGAVGGMAQEAPKLISVEFSDLADEQINTYSKQEAYT 182

Query: 177 PLVELIEQCLAQDPRPAYQTPAPE-REYGAQFWDLDVRWHYPQAG----LIRVLEVIPAK 231
            L  LI   L QDPRPAY+    + + Y    +DLD+ W     G     I+VLE+ P K
Sbjct: 183 DLAVLICGVLGQDPRPAYKKAKDDPKLYQVALYDLDIFWRMAVDGDDREYIQVLELKPGK 242