Pairwise Alignments

Query, 350 a.a., recombinase RecA from Pseudomonas fluorescens FW300-N2E3

Subject, 353 a.a., recombinase A (RefSeq) from Shewanella loihica PV-4

 Score =  481 bits (1239), Expect = e-141
 Identities = 238/350 (68%), Positives = 289/350 (82%)

Query: 1   MDDNKKKALAAALGQIERQFGKGAVMRMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRI 60
           +D NK+KAL+A LGQIE+QFGKG++M++G+     +  ISTGSL LD+ALG GGLP GRI
Sbjct: 3   IDANKEKALSAVLGQIEKQFGKGSIMKLGENRSMDVETISTGSLSLDVALGAGGLPLGRI 62

Query: 61  VEIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDT 120
           VEIYGPESSGKTTLTL VIA AQ+ G  CAF+DAEHALDP YA KLGV++D+LL SQPDT
Sbjct: 63  VEIYGPESSGKTTLTLEVIAAAQREGKVCAFIDAEHALDPIYAQKLGVDIDNLLCSQPDT 122

Query: 121 GEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGN 180
           GEQALEI D L RS AVDVIIVDSVAAL PKAEIEGE+GD H+GL AR+MSQA+RK+ GN
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182

Query: 181 IKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240
           +K +N L+IFINQIRMKIGVMFG+PETTTGGNALKFYASVRLDIRRTGA+K+ +EV+G+E
Sbjct: 183 LKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDREEVIGNE 242

Query: 241 TRVKVVKNKVASPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQG 300
           TRVKVVKNK+A+PF+QAEFQILYG+GI   GE++DLGV+H  +EKSGAWY+Y G KIGQG
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINRTGELVDLGVMHKLIEKSGAWYSYKGDKIGQG 302

Query: 301 KANSAKFLQDNPDIAATLEKQIRDKLLTPTPDVKASPVKETADDLADADI 350
           +AN+ K+L +NP+I A +++ +R  LL     V  S   +   DL   ++
Sbjct: 303 RANAGKYLVENPEIGAEIDQALRAMLLGGGQAVAQSATGDENVDLETGEV 352