Pairwise Alignments

Query, 350 a.a., recombinase RecA from Pseudomonas fluorescens FW300-N2E3

Subject, 348 a.a., recombinase A from Marinobacter adhaerens HP15

 Score =  555 bits (1429), Expect = e-163
 Identities = 279/343 (81%), Positives = 312/343 (90%), Gaps = 1/343 (0%)

Query: 1   MDDNKKKALAAALGQIERQFGKGAVMRMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRI 60
           M+DN+KKAL+AALGQIERQFGKGAVM+MGDQ R+AIPA+STGSLGLD+ALGIGGLP GRI
Sbjct: 1   MEDNRKKALSAALGQIERQFGKGAVMKMGDQPREAIPAVSTGSLGLDVALGIGGLPYGRI 60

Query: 61  VEIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDT 120
            EIYGPESSGKTTLTL VIA+AQKAG TCAFVDAEHALDP YA KLGVNVDDLLVSQPDT
Sbjct: 61  CEIYGPESSGKTTLTLQVIAEAQKAGKTCAFVDAEHALDPVYAEKLGVNVDDLLVSQPDT 120

Query: 121 GEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGN 180
           GEQALEI DMLVRSNAVDVIIVDSVAAL PKAEIEGEMGD HVGLQARLMSQALRK+TGN
Sbjct: 121 GEQALEIADMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTGN 180

Query: 181 IKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240
           +K+ANCL+IFINQIRMKIGVMFGSPETTTGGNALKFY+SVRLDIRR GAVK+GDEVVG+E
Sbjct: 181 VKHANCLMIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGAVKDGDEVVGNE 240

Query: 241 TRVKVVKNKVASPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQG 300
           TRVKVVKNKV+ PF+QAEFQI+YGKGIY   E++D+GV  GFV+KSGAWYAYNG KIGQG
Sbjct: 241 TRVKVVKNKVSPPFKQAEFQIMYGKGIYHMAEVLDMGVKEGFVDKSGAWYAYNGDKIGQG 300

Query: 301 KANSAKFLQDNPDIAATLEKQIRDKLLTPTPDVKASPVKETAD 343
           KAN+ KFL++N DIA  +E ++RDKL+ P P+ +    +E A+
Sbjct: 301 KANACKFLEENMDIANEIEAKVRDKLM-PKPEPRKDAKEEPAE 342