Pairwise Alignments

Query, 350 a.a., recombinase RecA from Pseudomonas fluorescens FW300-N2E3

Subject, 357 a.a., recA protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  407 bits (1047), Expect = e-118
 Identities = 206/344 (59%), Positives = 265/344 (77%), Gaps = 2/344 (0%)

Query: 2   DDNKKKALAAALGQIERQFGKGAVMRMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
           ++ +++AL  AL  IER++G GAVM++ D+   AIP I TGS+GLD+ALG+GG+P+GR+ 
Sbjct: 10  EEMRREALETALSTIERKYGLGAVMKLSDEAHVAIPVIPTGSIGLDLALGVGGVPRGRVT 69

Query: 62  EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
           EIYGPESSGKTTLTL +IA+AQK G T AF+DAEHALD  YA +LGVN ++LL+SQPD G
Sbjct: 70  EIYGPESSGKTTLTLHIIAEAQKRGGTAAFIDAEHALDVAYARRLGVNTEELLISQPDFG 129

Query: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
           EQAL+I DMLVRS AVD++++DSVAAL+P+AE+EG MGD  VG QARLMS ALRK+TG I
Sbjct: 130 EQALDIADMLVRSAAVDLVVIDSVAALIPQAELEGSMGDTQVGGQARLMSHALRKLTGTI 189

Query: 182 KNANCLVIFINQIRMKIGVM-FGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240
             +   VIFINQIRMKIG M +GSPETTTGGNALKFY+SVR+DIR+   +K+ +EV GS 
Sbjct: 190 HKSRTAVIFINQIRMKIGTMGYGSPETTTGGNALKFYSSVRMDIRKIQTLKDKEEVYGSR 249

Query: 241 TRVKVVKNKVASPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQG 300
           TRVK+VKNKVA PFR+A F ILYG GI   GE+IDLG   G ++KSG+W+A+   ++GQG
Sbjct: 250 TRVKIVKNKVAPPFREALFDILYGTGISRTGEIIDLGSDAGIIDKSGSWFAFGSERLGQG 309

Query: 301 KANSAKFLQDNPDIAATLEKQIRDKLLTPTPDVKASPVKETADD 344
           K N    L++N  +   +E ++ +  L  TP   AS  +E A+D
Sbjct: 310 KENVRALLEENAPLREAIEAKLIEH-LGMTPTKFASSGEEPAND 352