Pairwise Alignments

Query, 206 a.a., ribonuclease HII from Pseudomonas fluorescens FW300-N2E3

Subject, 208 a.a., ribonuclease H (RefSeq) from Shewanella loihica PV-4

 Score =  213 bits (541), Expect = 3e-60
 Identities = 114/187 (60%), Positives = 129/187 (68%), Gaps = 3/187 (1%)

Query: 16  AGVDEVGRGPLCGAVVTAAVILDPNRPILGLNDSKKLTEARREKLYDEICEKALSWCIAR 75
           AGVDEVGRGPL G VVTAAV+LDPN PI GLNDSKKL+E +R+ LY+EI  KAL   + R
Sbjct: 21  AGVDEVGRGPLVGDVVTAAVVLDPNNPIEGLNDSKKLSEKKRDALYEEILAKALDVSVGR 80

Query: 76  AEVEEIDELNILHATMLAMQRAVEGLHITPKLAMIDGNRCPKL---AMPAEAVVKGDSKV 132
               EIDELNILHATMLAMQRAV GL   P   +IDGNR P      +   AV+KGD  +
Sbjct: 81  CSPLEIDELNILHATMLAMQRAVAGLRARPDRVLIDGNRVPDFTDETLEGHAVIKGDGLI 140

Query: 133 PAIAAASILAKVSRDREMAAFELIYPGYGIGGHKGYPTPVHLEALARLGPTPIHRRSFAP 192
           PAI+AASI+AKV RDREM A +  YP YG   HKGYPT  H EAL   G    HR+SF P
Sbjct: 141 PAISAASIVAKVVRDREMEALDERYPEYGFAKHKGYPTKAHFEALEAHGVLAEHRKSFRP 200

Query: 193 VRLAYEA 199
           V+   EA
Sbjct: 201 VKERLEA 207