Pairwise Alignments

Query, 900 a.a., protein-PII uridylyltransferase from Pseudomonas fluorescens FW300-N2E3

Subject, 856 a.a., PII uridylyl-transferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  683 bits (1762), Expect = 0.0
 Identities = 371/858 (43%), Positives = 527/858 (61%), Gaps = 13/858 (1%)

Query: 29  KKAIRQAQEVLDARFRSGRDIRRLIEDRAWFVDNILQQAWEQFNWSEDADIALVAVGGYG 88
           K +++   + L   F +  D+  L+  R   VD +LQ AW Q     +  IALVAVGGYG
Sbjct: 8   KASLQALNQELALAFAAREDVVELVRRRCRVVDELLQTAWSQHGLG-NYPIALVAVGGYG 66

Query: 89  RGELHPYSDIDLLILLDNADHEVFRDSIERFLTLLWDIGLEVGQSVRSVDECAEQARADL 148
           RGELHP+SDIDLL+L+D    +     +  F+  LWD GLE+G SVR++ +     R D+
Sbjct: 67  RGELHPHSDIDLLMLVDEKLPKEAEFVLGYFIAFLWDAGLEIGHSVRTIKDTLTLGRDDI 126

Query: 149 TIITNLMESRTIAGPEHLRQRMLDVTSTEHMWPAKDFFLAKRAEQKARHHKYNDTEYNLE 208
           TI TNL+E+R + G E L   + D   T+  WP+ DFF+AKR EQ+ARH K +   ++LE
Sbjct: 127 TIATNLLEARFLTGTEPLFDELYDAIRTQDFWPSSDFFVAKRDEQQARHTKAS--AFDLE 184

Query: 209 PNVKGSPGGLRDIQTILWVARRQYGTLNLRALAGEGFLVESENALLASSQEFLWKVRYAL 268
           PNVK  PGGLRDIQT+ WVA R +    L  L G GFL   E   L   Q+FLW++R+AL
Sbjct: 185 PNVKSCPGGLRDIQTVAWVAMRHFNASRLEELVGHGFLEPIELEELLECQQFLWQIRFAL 244

Query: 269 HMLAGRAEDRLLFDHQRSIAGLLGFEGDDAKHAIENFMQQYYRVVMSIAQLSDLIIQHFE 328
           H+ +GR E+RLLFD QR +A LLG+E D  + A+E  M+ YYR V  + +L+++++Q F+
Sbjct: 245 HIASGRDENRLLFDLQRQVAELLGYE-DKTQLAVEQMMKLYYRTVRRVMELNEMLLQLFK 303

Query: 329 EVILAPEDEAPPQPINSRFQLHDGYIEAINTNVFRRTPFAMLEIFVLMAQQPEIKGVRAD 388
              L         PIN  FQ    +IEA++ N F + P  ++ +F+L+A+   I+G+ A 
Sbjct: 304 RATLGHTKALEIVPINDNFQRRGSFIEALSANPFVK-PEDIMGLFLLIARNSNIRGIYAP 362

Query: 389 TIRLLREHRHLIDDDFRNDIRNTSLFIELFKCKIGIHRNLRRMNRYGILGRYLPEFGFIV 448
           T+R +R+ R  +            +F+E+ +   GI      M+++GIL  YLP +  I 
Sbjct: 363 TLRSMRQARKALTQPLMEYAECRQVFMEILRHPRGISA-FSLMHKHGILSAYLPAWRAIE 421

Query: 449 GQMQHDLFHIYTVDAHTLNLIKHLRKLQYTQVSEKFPLASKLMGKLPKPELIYLAGLYHD 508
           GQMQ DLFH YTVD HT  L+ ++ +    +  ++FPL S L+ +LPK  L+ LA ++HD
Sbjct: 422 GQMQFDLFHAYTVDEHTHRLLLNIERFSQPEQKDEFPLGSVLINQLPKKGLLVLAAIFHD 481

Query: 509 IGKGRHGDHSDIGAVDAEAFCQRHQLPLWDSRLIVWLVQNHLVMSTTAQRKDLSDPQVIH 568
           I KGR GDHS +GAVDA AFC+ H L   D RL+ WLV+NHL+MS TAQR+D+SDP V+ 
Sbjct: 482 IAKGRGGDHSKLGAVDALAFCKSHGLNDHDGRLVSWLVENHLMMSVTAQRRDISDPDVVA 541

Query: 569 DFAQIVGDETRLDYLYVLTVSDINATNPTLWNSWRASLLRQLYTETKRALRRGLENPVDR 628
           DFA  V D   L YLY LTV+DI ATN   WN+W+ SLLR LY  T+R L RG E PVD 
Sbjct: 542 DFAGKVRDAVHLSYLYCLTVADICATNEKTWNNWKGSLLRDLYFSTQRVLARGKEKPVDI 601

Query: 629 EEQIRQTQRAALDILVRGGTDPDDVEQLWSQLGDDYFLRHTAGDVAWHTEAILQQPADGG 688
             ++R+ Q  A   L+R G    +++ LW++   DYFLRH    +AWH E IL+   D  
Sbjct: 602 RARVREYQAKAKKELLRRGVKEKELDALWARFKADYFLRHQPNQIAWHAEGILKHRQD-E 660

Query: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSTSQFTLDT 748
           PLVLI + T R   GGT++F+Y  D+   FA  +A +D  N+N+HDA V+TS   + LD+
Sbjct: 661 PLVLISKHTTR---GGTELFVYCRDKPKLFATVMAVLDNKNINVHDATVMTSKDNYALDS 717

Query: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHN 808
           +++L+ DG+ +    +R++ IR GL +AL + +  PT   R++ R++K F    QV+   
Sbjct: 718 FVILEQDGEPL-MQLSRIQSIRKGLEKALASENPRPTKF-RKLSRKMKPFNVPTQVSFLP 775

Query: 809 DAQRQVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDASNHPL 868
            ++   +++EL A D PGLLAR+G IF   +++L  AKI T+GER ED F +       L
Sbjct: 776 GSRHGTSMMELIALDMPGLLARVGDIFYRCEITLLAAKITTIGERAEDFFVLQTNDGQAL 835

Query: 869 SDPQLCSRLQDAIVEQLS 886
           SD +   RL++A+V  LS
Sbjct: 836 SDEEQ-RRLKEALVSALS 852