Pairwise Alignments

Query, 900 a.a., protein-PII uridylyltransferase from Pseudomonas fluorescens FW300-N2E3

Subject, 861 a.a., protein-P-II uridylyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  671 bits (1731), Expect = 0.0
 Identities = 362/858 (42%), Positives = 521/858 (60%), Gaps = 12/858 (1%)

Query: 29  KKAIRQAQEVLDARFRSGRDIRRLIEDRAWFVDNILQQAWEQFNWSEDADIALVAVGGYG 88
           K+++ +  + L ARF++   I  L+  R  FVD++++QAW+Q    +   IAL+AVGGYG
Sbjct: 8   KQSLIEQNQTLLARFKAKTPIEELVTQRCQFVDSLVKQAWQQHGLDQ-YPIALIAVGGYG 66

Query: 89  RGELHPYSDIDLLILLDNADHEVFRDSIERFLTLLWDIGLEVGQSVRSVDECAEQARADL 148
           RGELHP+SD+DLL L +    +    ++  F+  LWD  LE+G SVR++D+     R D+
Sbjct: 67  RGELHPHSDVDLLFLFEGELSKAAETTLSEFIAFLWDANLEIGHSVRTLDDTLRLGRDDI 126

Query: 149 TIITNLMESRTIAGPEHLRQRMLDVTSTEHMWPAKDFFLAKRAEQKARHHKYNDTEYNLE 208
           TI TNL+E+R + GPE L  ++ D       W + +FF+AKR EQ ARH K +   ++LE
Sbjct: 127 TIATNLLEARLLTGPETLFDQLYDAIRQSDFWTSSNFFIAKRDEQTARHAKAS--AFDLE 184

Query: 209 PNVKGSPGGLRDIQTILWVARRQYGTLNLRALAGEGFLVESENALLASSQEFLWKVRYAL 268
           PN+K  PGGLRDIQTI WVA R +G   L  L    FL  +E   L   Q FLWK+R+AL
Sbjct: 185 PNIKSCPGGLRDIQTIAWVAMRHFGASRLEELVEYEFLEPAELEELLECQHFLWKLRFAL 244

Query: 269 HMLAGRAEDRLLFDHQRSIAGLLGFEGDDAKHAIENFMQQYYRVVMSIAQLSDLIIQHFE 328
           HM  GR E+RLLFD QR +A L+G+E D  + A+E  M++YYR V  + +L+++++Q F+
Sbjct: 245 HMAVGRDENRLLFDVQRQVAELMGYE-DATQLAVEQMMKRYYRTVRRVMELNEMLLQLFK 303

Query: 329 EVILAPEDEAPPQPINSRFQLHDGYIEAINTNVFRRTPFAMLEIFVLMAQQPEIKGVRAD 388
              L        Q I+  +Q    +IEA++ ++F      ++ +FV +A+   IKG+ A 
Sbjct: 304 RATLGHTKALEIQAIDDNYQRRGAFIEALSDDLFDSGE-EIVRLFVHIAKNSNIKGIYAP 362

Query: 389 TIRLLREHRHLIDDDFRNDIRNTSLFIELFKCKIGIHRNLRRMNRYGILGRYLPEFGFIV 448
           T+R LR  R       + +      F+E+ K   GI   L  M+++G+L  YLP +  I 
Sbjct: 363 TLRSLRRARRAQLQPLQENPLCRQAFMEILKHPRGIAA-LSLMHKHGVLSAYLPAWRNIE 421

Query: 449 GQMQHDLFHIYTVDAHTLNLIKHLRKLQYTQVSEKFPLASKLMGKLPKPELIYLAGLYHD 508
           GQMQ DLFH YTVD HT  L+ ++ +    +  E+FPL S L+ +LPK  L+ L  ++HD
Sbjct: 422 GQMQFDLFHAYTVDEHTHRLLLNIERFSQPEQKEEFPLGSVLINQLPKKGLLVLGAIFHD 481

Query: 509 IGKGRHGDHSDIGAVDAEAFCQRHQLPLWDSRLIVWLVQNHLVMSTTAQRKDLSDPQVIH 568
           I KGR GDHS +G+ DA AFC+ H L   D RL+ WLV+NHLVMS TAQR+D+SDP V+ 
Sbjct: 482 IAKGRGGDHSKLGSSDALAFCKLHGLNDHDGRLVAWLVENHLVMSVTAQRRDISDPDVVA 541

Query: 569 DFAQIVGDETRLDYLYVLTVSDINATNPTLWNSWRASLLRQLYTETKRALRRGLENPVDR 628
           DFA  V D   L YLY LTV+DI ATN   WN+W+ SLLR LY  T+R L RG E PVD 
Sbjct: 542 DFASKVRDAVHLSYLYCLTVADICATNEKTWNNWKGSLLRDLYFSTQRVLARGKEKPVDI 601

Query: 629 EEQIRQTQRAALDILVRGGTDPDDVEQLWSQLGDDYFLRHTAGDVAWHTEAILQQPADGG 688
             ++R+ Q  A   L+R G    D++ LW +   DYFLRH    VAWH EAIL+      
Sbjct: 602 RARVREYQAKAKKELLRRGIKEKDLDTLWQRFKADYFLRHQPNQVAWHAEAILKHKQVDE 661

Query: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSTSQFTLDT 748
           PLVL+ + T R   GGT++F+Y  D+   FA  +A +D  N+N+HDA ++TS   + LDT
Sbjct: 662 PLVLVSKHTTR---GGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKDNYALDT 718

Query: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIHN 808
           +++L+ DG+ +    +R++ IR  L +AL + DN      R++ R++K F    QV+   
Sbjct: 719 FVILEQDGEPV-SQLSRIQSIRKALEKALAS-DNPKLPRFRKLSRKMKPFNVPTQVSFLE 776

Query: 809 DAQRQVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDASNHPL 868
             +   +++EL A D PGLLA++G IF   + +L +AKI T+GER ED F +       L
Sbjct: 777 SNRHGTSMMELIALDTPGLLAKVGDIFYRCNTTLLSAKITTIGERAEDFFILQTNDGLQL 836

Query: 869 SDPQLCSRLQDAIVEQLS 886
           ++ Q    L++A++  LS
Sbjct: 837 NETQE-HTLKEALISALS 853