Pairwise Alignments

Query, 900 a.a., protein-PII uridylyltransferase from Pseudomonas fluorescens FW300-N2E3

Subject, 943 a.a., UTP-GlnB uridylyltransferase, GlnD (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  388 bits (997), Expect = e-112
 Identities = 270/899 (30%), Positives = 435/899 (48%), Gaps = 52/899 (5%)

Query: 1   MPQVDPE--LFDRGQFQAELALKASPIAAFKKAIRQAQEVL--DAR------FRSGRDI- 49
           +P V P   +FD    +AE    +    A   A+R+A   L  DAR       R+G D  
Sbjct: 28  LPLVAPADAIFDTATIRAEADRLSQAEGASASAVRKAVVGLLKDARKQGLATIRAGLDAA 87

Query: 50  ----RRLIEDRAWFVDNILQQAWEQFNW--------SEDADIALVAVGGYGRGELHPYSD 97
               R  +   A+  D ++  A              ++   ++++AVGGYGRGE+  +SD
Sbjct: 88  PFSARETVRAYAYLTDGLVTTALHVAQTHLHPLPTPTDGERLSVLAVGGYGRGEMALHSD 147

Query: 98  IDLLILLDNADHEVFRDSIERFLTLLWDIGLEVGQSVRSVDECAEQARADLTIITNLMES 157
           +DLL L            IE  L +LWD+ L+VG + R+V +C   AR D TI T L+E+
Sbjct: 148 VDLLFLTPYKITPWAESVIETTLYMLWDLKLKVGHASRTVRDCLRLARDDYTIRTALLEN 207

Query: 158 RTIAGPEHLRQRMLDVTSTE-HMWPAKDFFLAKRAEQKARHHKYNDTEYNLEPNVKGSPG 216
           R + G   L  ++     +E     ++D+  AK  E++ RH +     + LEPNVK   G
Sbjct: 208 RLLYGDAELAAKLRKRLKSELFQGTSQDYIEAKLEEREQRHTRQGGQRFMLEPNVKEGKG 267

Query: 217 GLRDIQTILWVARRQYGTLNLRALAGEGFLVESENALLASSQEFLWKVRYALHMLAGRAE 276
           GLRD+Q++ W+A+  +G   ++ L   G     E  L  +++ FLW VR  LH+++GRA 
Sbjct: 268 GLRDLQSLYWIAKYVHGVETVQELENLGVFTHEERVLFDTAETFLWAVRCHLHIVSGRAT 327

Query: 277 DRLLFDHQRSIAGLLGFEGDDAKHAIENFMQQYYRVVMSIAQLSDLIIQHFEEV------ 330
           D+L FD Q  +A  LGF   D +  +E+FMQ Y+R   S+  L+ + +   E        
Sbjct: 328 DQLTFDMQVEVADRLGFADRDGRRGVEHFMQLYFRHATSVGDLTRIFLTALEASHAKREP 387

Query: 331 -ILAPEDEAPPQPINSRFQLHDGYIEAINTNVFRRTPFAMLEIFVLMAQQPEIKGVRADT 389
            ++     +  + +   +++    +   +   F R P  ML IF    +   +  +  D 
Sbjct: 388 RLIGMIKRSRRKKVKEAYEVRQNRLAIADPETFFRDPINMLRIFEEALRTGYL--LHPDA 445

Query: 390 IRLLREHRHLIDDDFRNDIRNTSLFIELFKCKIGIHRNLRRMNRYGILGRYLPEFGFIVG 449
           +  ++ +  LID+  R++     +F +L        R LRRMN  G+LG  +PEF  IV 
Sbjct: 446 MLRIKANLSLIDNRVRSNKEANRIFFDLLLKHGNPERALRRMNELGVLGALIPEFQKIVA 505

Query: 450 QMQHDLFHIYTVDAHTLNLIKHLRKLQYTQVSEKFPLASKLMGKLPKPELIYLAGLYHDI 509
            MQ +++H YTVD H +  I +L +++  ++ E  P+AS+++ +    +++Y A L HDI
Sbjct: 506 MMQFNVYHQYTVDEHIIQCISNLAEIERGELVESLPVASRILKQGVNRKVLYTALLLHDI 565

Query: 510 GKGRHGDHSDIGAVDAEAFCQRHQLPLWDSRLIVWLVQNHLVMSTTAQRKDLSDPQVIHD 569
           GKGR  DHS +GA  A            D   + WLV+ HL+MS  AQ++DL+DP+ I D
Sbjct: 566 GKGRPEDHSVVGAQIARQVAPHMGFNPRDCETVEWLVRYHLLMSDMAQKRDLADPRTIRD 625

Query: 570 FAQIVGDETRLDYLYVLTVSDINATNPTLWNSWRASLLRQLYTETKRALRRGLE--NPVD 627
           FA+ V    RLD L VLTV DI    P  WN+W+A L+R LY  T  AL  GLE  N   
Sbjct: 626 FAKAVRTRERLDLLTVLTVCDIRGVGPGTWNNWKAQLIRSLYWMTAEALENGLEDLNRET 685

Query: 628 REEQIRQTQRAALDILVRGGTDPDDVEQLWSQLGDDY--FLRHTAGDVAWHTEAILQQPA 685
            E   ++  RAAL    R        + L  + G  Y  + +   GD       +L+   
Sbjct: 686 LETDAKRALRAALSDWPR--------KDLRLETGRHYGPYWQGLPGDAHVTLAHLLRGIE 737

Query: 686 DGGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSTSQFT 745
           D    + +     R+    T++     D    FA    A+  +  N+ DAR  T+   + 
Sbjct: 738 DDQVRLDLTLDADRDV---TRVSFAMADHPGIFARLAGALALVGANVVDARTYTTKDGYV 794

Query: 746 LDTYIVLDTDGDSIGDNPARVKQIRDGLTEALRNP--DNYPTIIQRRVPRQLKHFAFAPQ 803
              + V D DG    +  +R+ ++R  + + L      +   + + +V ++   F F   
Sbjct: 795 TACFWVQDADGKPYDE--SRLPRLRKMIDKTLSGEVVTSQALVSKDKVKKRDAQFRFPTS 852

Query: 804 VTIHNDAQRQVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD 862
           ++  N+     T++E+   DRPGLL  +     + ++ + +A+IAT G +V D F++ D
Sbjct: 853 ISFDNEGSEIYTLIEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVDTFYVKD 911



 Score = 32.0 bits (71), Expect = 2e-04
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 2/79 (2%)

Query: 809 DAQRQVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE-RVEDVFFITDASNHP 867
           DA R VT +  +  D PG+ AR+         ++ +A+  T  +  V   F++ DA   P
Sbjct: 748 DADRDVTRVSFAMADHPGIFARLAGALALVGANVVDARTYTTKDGYVTACFWVQDADGKP 807

Query: 868 LSDPQLCSRLQDAIVEQLS 886
             + +L  RL+  I + LS
Sbjct: 808 YDESRL-PRLRKMIDKTLS 825