Pairwise Alignments

Query, 444 a.a., chemotaxis protein CheY from Pseudomonas fluorescens FW300-N2E3

Subject, 379 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 100/374 (26%), Positives = 165/374 (44%), Gaps = 43/374 (11%)

Query: 1   MDEPLKPRVLLVDDEESILNSLRRLLRGQPYEVLLATSGTQALEIMEQQPVDLVMTDARM 60
           M++  +  +L+VDD    +  + + L  Q Y +  A SG  ALEI+ Q P+DLV+ D  M
Sbjct: 3   MEDLSQCTILIVDDSPDNIAFMSQGL-AQYYRIKAARSGKVALEILAQYPIDLVLLDIVM 61

Query: 61  PNMDGATLLAHIHEHYPDTVRI---LLTGYADLSMIIKAINEGQIHRYISKPWNDEEMLL 117
           P M G  ++  I +H P T  I    LTG ++          G +  Y+ KP     + +
Sbjct: 62  PEMSGYEVINQI-KHNPHTEHIPVIFLTGKSNPEDEQLGFELGAVD-YVFKP-----VSI 114

Query: 118 TLRQSLAYQLSERERLRLVQLTWDQNEQLKLLNVSLEKRVAARTAELQQTADMLDLAYEE 177
            L +S  +   + +R + + L  +QN+ L       E  V  R+ EL +  D +  A   
Sbjct: 115 PLLKSRVHTHLQNKRSKDILL--NQNDYL-------ETEVLRRSGELDRMQDAVVFALAS 165

Query: 178 LKHSYVTGTEVFSLLANLRLPPAKQTNRQIIDLVRIYCQTHGLDEASSRDLT----MAAA 233
           L  +    T    L          +T   +  L +    T    +  S  +      AA 
Sbjct: 166 LAETRDPETGNHLL----------RTQHYVKVLAQRLATTDKYRDVLSPTVIDTYFKAAP 215

Query: 234 LYNIGKLSWTDGMMTTPSDLLHHPERELYRGYPKQSESLLMTLEPMKDAARLILH----- 288
           L++IGK+   D ++  P  L    E    R +    +  L   E +  A   +++     
Sbjct: 216 LHDIGKVGIPDNILLKPGKLTPD-EFTTMRNHALLGKLALEKAEKLSGACTALINVAKEI 274

Query: 289 ---HQERWDGSGFPDRLKGEAIPLGSRLLKLAVDFIELQCGLILERNMNSDEALLFIRKY 345
              H E+WDGSG+P  LKG+ IPL +RL+ LA  +  L C  + +  M+ +EA   I + 
Sbjct: 275 AMGHHEKWDGSGYPLGLKGDDIPLSARLMALADVYDALICRRVYKEPMSHEEAKAIILQG 334

Query: 346 TGRFYDPELVEDFV 359
            G  +DP +++ F+
Sbjct: 335 RGSHFDPMVIDAFL 348