Pairwise Alignments

Query, 444 a.a., chemotaxis protein CheY from Pseudomonas fluorescens FW300-N2E3

Subject, 390 a.a., Response regulator receiver domain protein (CheY) (NCBI) from Rhodospirillum rubrum S1H

 Score =  100 bits (250), Expect = 6e-26
 Identities = 110/415 (26%), Positives = 188/415 (45%), Gaps = 61/415 (14%)

Query: 9   VLLVDDEESILNSLRRLLRGQPYEVLLATSGTQALEIMEQ-QPVDLVMTDARMPNMDGAT 67
           VL++DD+ ++L++++R LRG+ + V  A SG +AL ++   +   +V+ D RM  M+G  
Sbjct: 5   VLIIDDDANLLSAMKRQLRGR-FAVTTAQSGEEALGLLGAGEAPAVVLCDMRMGGMNGVE 63

Query: 68  LLAHIHEHYPDTVRILLTGYADLSMIIKAINEGQIHRYISKPWNDEEMLLTLRQSLA-YQ 126
            L  + +  PDTVR++LTG AD    I AINEG I R+ SKP   + +   L  ++A Y+
Sbjct: 64  TLRKVRDLAPDTVRMMLTGNADTQTAIDAINEGNIFRFFSKPCTPQVLEAGLEAAVAQYR 123

Query: 127 LSERERLRLVQLTWDQNEQLKLLNVSLEKRVAARTAELQQTADMLDLAYEELKHSYVTGT 186
           L   ER               LL  +L       +  ++   DML L Y           
Sbjct: 124 LVTAER--------------DLLEKTL-------SGSIRVLMDMLALTY----------P 152

Query: 187 EVFSLLANLRLPPAKQTNRQIIDLVRIYCQTHGLDEASSRDLTMAAALYNIGKLSWTDGM 246
             ++  A LR    K T                 +      L +A+ L  +G ++  + +
Sbjct: 153 RGYARAARLRGWVRKMTRDN--------------NMPHRWQLDIASMLAPLGLVALPEAV 198

Query: 247 MTT--PSDLLHHPERELYRGYPKQSESLLMTLEPMKDAARLILHHQERWDGSGF-PDRLK 303
           +      + L   ER +    P+ + +++  +  ++  A ++      +DGSGF P+   
Sbjct: 199 LAKLHRREPLSDEERAMVERSPEAARNVINHIPRLQGVAEIVYLQNRGFDGSGFPPEGPS 258

Query: 304 GEAIPLGSRLLKLAVDFIELQCGLI-LERNMNSDEALLFIRKYTGRFYDPELVEDFVQVC 362
           G  IP  SRLL++  D  ++    + L  +    EA         R+YD  L+   V++C
Sbjct: 259 GVDIPFDSRLLRILNDLGDVVGDSVPLAGHFAELEA-------NARWYDGALLRK-VRLC 310

Query: 363 ATYQRDITLGDPTVKVLSTRDLAAGMVLARNLNADNGMLLLNAGKVLNGPLVEKL 417
                   +  P  + LST  L AGMV++ ++  + G LLL A   ++   +E+L
Sbjct: 311 LEAPAGKGI-KPAFRKLSTDTLIAGMVVSDDVVGEGGRLLLAALTPVSEAHIERL 364