Pairwise Alignments

Query, 252 a.a., pilus assembly protein PilW from Pseudomonas fluorescens FW300-N2E3

Subject, 344 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score = 43.5 bits (101), Expect = 6e-09
 Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 2/140 (1%)

Query: 40  YVQLGVGYLQQGMTERAKVPLKKALELDSADPDANAALGLVFQAEMEPELADQHFRKALS 99
           +V  G   L+ G+   +     KAL +D  + +A   LG V       + A + + K+L+
Sbjct: 62  WVNKGNSLLKLGIYGESTECFDKALLIDPENSEAFNGLGTVLSKTGNYQKALEMYDKSLN 121

Query: 100 GRPGDARILNNYGSFLFEEKRYKEAYERFEQAAADSLYPERSRVFENLGMTASMLGQRDL 159
               ++    N G  L   +RY EA + F+++   S+  + S V+ N G T   LG+ + 
Sbjct: 122 IDSENSEAWKNKGITLNNMQRYSEAIDCFDKSI--SINAKNSDVWYNKGETQFKLGEYEK 179

Query: 160 ARQQLEKALRLNRQQPRALL 179
           +     KAL ++ +   ALL
Sbjct: 180 SIDSYNKALLIDEKMETALL 199



 Score = 30.0 bits (66), Expect = 7e-05
 Identities = 22/116 (18%), Positives = 55/116 (47%), Gaps = 4/116 (3%)

Query: 98  LSGRPGD--ARILNNYGSFLFEEKRYKEAYERFEQAAADSLYPERSRVFENLGMTASMLG 155
           ++G  GD  ++  N+ G  L+ +  Y ++   +  A  ++  P+ + ++ N G +   LG
Sbjct: 16  MAGCIGDQKSKSYNDKGLELYNQGNYVDSISEYNLALLEN--PKSAEIWVNKGNSLLKLG 73

Query: 156 QRDLARQQLEKALRLNRQQPRALLEMAELSYEDRHYVPARDYYDRFSLLAEQNARS 211
               + +  +KAL ++ +   A   +  +  +  +Y  A + YD+   +  +N+ +
Sbjct: 74  IYGESTECFDKALLIDPENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEA 129