Pairwise Alignments

Query, 467 a.a., poly(A) polymerase from Pseudomonas fluorescens FW300-N2E3

Subject, 480 a.a., poly(A) polymerase (RefSeq) from Shewanella loihica PV-4

 Score =  387 bits (995), Expect = e-112
 Identities = 202/451 (44%), Positives = 290/451 (64%), Gaps = 11/451 (2%)

Query: 3   KKLFQSFRSPLRRTQHIRSTPEVLNSSQHSLQRAQFSRYAVNIVERLQSAGYQAYLVGGC 62
           K+LF+  ++    T    S  E++    H++ R   S  A+ ++ RL  +G++AYLVGG 
Sbjct: 30  KQLFEDNQNTTETTPAGLSL-EIVARKHHAISRQHISENAIKVLYRLHKSGFKAYLVGGG 88

Query: 63  VRDMLLNITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRANHP 122
           VRD+LL + PKDFDV T+ATPE+++  FRN R++GRRF+L HI FGR++IEVAT R +H 
Sbjct: 89  VRDILLGLEPKDFDVVTNATPEEIKKLFRNCRLVGRRFRLAHIVFGRDVIEVATLRGHHV 148

Query: 123 QNDEEEDSNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGVHD 182
            + E+     S  N  GR+LRDNVYGT++EDA+RRDFT+NALYYD     I  Y  G+ D
Sbjct: 149 DSGEKI----SKVNAEGRLLRDNVYGTIDEDAERRDFTVNALYYDISDFSIHSYGGGLQD 204

Query: 183 IRNHLIRLIGDPTQRYQEDPVRMLRAVRFAAKLDFGIEKHSATPIRNLAPMLREIPSARL 242
           + +  +RLIGDP +RY+EDPVRMLRAVRFA KL   I+K +A PI  LAP+L++IP+AR+
Sbjct: 205 LESRTLRLIGDPQKRYREDPVRMLRAVRFATKLGMSIDKAAAQPISELAPLLKDIPAARM 264

Query: 243 FEEVLKLFLSGHAADTFEMLVDLQLFDPLFPASAEALEHNPT-YTHTLISEALINTDLRI 301
           +EEVLKLF +G A + + M+ D  LF PLFP     LE +P   +H ++   + NTD R+
Sbjct: 265 YEEVLKLFFAGQAQNNYVMMRDFGLFAPLFPLVDNLLEEDPKGPSHKMVKAIMRNTDERV 324

Query: 302 KQNKPVTPAFLFAALLWPALPARVLRLQ-DRGMPPIPAMQEAAHELISEQCQRIAIPKRF 360
           +Q+K VTPAF +AA+LW  L  R   +  + G+    A   A  +++ +QC+ I+IP+RF
Sbjct: 325 EQDKSVTPAFFYAAMLWYPLSQRADDIALESGLSQYDAFYAAMGDVMEQQCRTISIPRRF 384

Query: 361 TMPIREIWDMQERLPRRSGKRADLLLDNPRFRAGYDFLLLR-ESAGEQTNGLGEWWTDYQ 419
           + P ++IW +Q R  R  G RA   +++P+FRA YD LLLR E+ G        WW  + 
Sbjct: 385 STPAKDIWQLQLRFERNQGTRAFKFIEHPKFRAAYDLLLLRAEAEGGNLAKTAAWWKSFV 444

Query: 420 DANESERRDMIRDLSGKDDGASGAPRKRRRS 450
           + +E +R  + R     + G+     +RRRS
Sbjct: 445 EGSEEQRSVIAR---STNKGSRSRNNRRRRS 472