Pairwise Alignments

Query, 359 a.a., tRNA (uracil-5-)-methyltransferase from Pseudomonas fluorescens FW300-N2E3

Subject, 444 a.a., 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) from Xanthomonas campestris pv. campestris strain 8004

 Score = 87.4 bits (215), Expect = 7e-22
 Identities = 61/183 (33%), Positives = 92/183 (50%), Gaps = 16/183 (8%)

Query: 181 FTQPNGTVNQKMLNWAYDALGDRCDD-LLELYCGNGNFTLPLATRVRKVLATEISKTSVN 239
           F Q N ++NQKM+  A   L  + DD +L+L+CG GNFTLPLA  VR+V+  E     V 
Sbjct: 274 FIQVNASLNQKMIAHALALLDAKPDDRVLDLFCGLGNFTLPLARTVREVVGVEGDAGLVA 333

Query: 240 AALSNLSENAVDNVTLVRLSAEELTEALNEVRPFRRLHGIDLKSYEFGSVFVDPPRAGMD 299
            A  N   N +DN    +  A +LT+   +    R+          F  + +DPPR+G  
Sbjct: 334 RARENAQRNGLDN---AQFYAADLTQDQRQTAWMRQ---------GFDKLLLDPPRSGAI 381

Query: 300 PDTCEL-TRRFENILYISCNPETLAANIAQL--HDTHRITRCAMFDQFPWTHHMESGVLL 356
               +L  ++F+ I+Y+SC+P +LA +   L       +      D FP T H+ES  + 
Sbjct: 382 DVLQQLPLKQFKRIVYVSCHPGSLARDAGYLVNEQGFSLLSAGAMDMFPHTAHVESIAVF 441

Query: 357 TRR 359
            +R
Sbjct: 442 EKR 444