Pairwise Alignments

Query, 754 a.a., DNA topoisomerase IV from Pseudomonas fluorescens FW300-N2E3

Subject, 758 a.a., DNA topoisomerase IV subunit A from Sinorhizobium meliloti 1021

 Score =  511 bits (1315), Expect = e-149
 Identities = 299/763 (39%), Positives = 445/763 (58%), Gaps = 51/763 (6%)

Query: 10  DGVERRSLADFTENAYLNYSMYVIMDRALPHIGDGLKPVQRRIIYAMSELGLDADSKHKK 69
           D ++   L    E  YL Y++  IM RALP + DGLKPV RRII+AMSE+GL  +S  KK
Sbjct: 13  DNIQPVDLKAALEERYLAYALSTIMHRALPDVRDGLKPVHRRIIHAMSEMGLRPNSSFKK 72

Query: 70  SARTVGDVLGKFHPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPDDPKSFAAMRYTE 129
            AR VGDV+GKFHPHGD + Y+A+V +AQ FS RY +VDGQGN+G  D   + AA RYTE
Sbjct: 73  CARIVGDVIGKFHPHGDQSVYDALVRLAQDFSQRYPVVDGQGNFGNIDGDNA-AAYRYTE 131

Query: 130 ARLSRYSEVLLSELGQGTADWGPNFDGTLDEPLVLPARLPNILLNGTTGIAVGMATDVPP 189
           A+++  + +LL  + Q   D+ P ++    EP VLP   PN+L NG +GIAVGMAT +PP
Sbjct: 132 AKMTEVAALLLEGIDQDAVDFRPTYNEEDQEPTVLPGAFPNLLANGASGIAVGMATSIPP 191

Query: 190 HNLREVATACVRLLDEPKATVEQLCEH--------IQGPDYPTEAEIITPRADLLKIYET 241
           HN  E+  A + L+  P ATVE L           I+GPD+PT   I+  RA + + Y T
Sbjct: 192 HNAHELCDAALHLIKHPDATVEDLLFDPANPQRGGIEGPDFPTGGVIVESRASMAESYRT 251

Query: 242 GRGSVRMRAVYHIED-----GDIVVTALPHQVSGAKVLEQIAAMMQAKPSKAPQVADLRD 296
           GRG  R+RA + +ED       IVVT +P+QV  ++++E+IA ++ A+  K P + D+RD
Sbjct: 252 GRGGFRVRARWAVEDLGRGGFQIVVTEIPYQVQKSRLIEKIAELLIAR--KLPLLEDIRD 309

Query: 297 ESDHENPCRIVIIPVNSRVDHEALMQHLFASTELESSYRVNINIIGLDGKPQLKNLRALL 356
           ES  +   R+V++P +  VD   LM+ LF  TELES   +N+N++ +   P++  L  +L
Sbjct: 310 ESAED--VRVVLVPKSRSVDANILMESLFKLTELESRIPLNMNVLSMGRVPRVMALNEVL 367

Query: 357 VEWLEFRVQTVRRRLQFRLDKVERRLHLLDGLLIAYLNLDEVIHIIRTEEHPKAKLIERF 416
            EWL  R + ++RR + RL  ++RRL +L G LIAYLN+DEVI IIR E+ PKA +IERF
Sbjct: 368 SEWLAHRREVLQRRSRHRLAAIDRRLEILGGYLIAYLNIDEVIRIIREEDEPKAVMIERF 427

Query: 417 ALSEIQADYILDTRLRQLAKLEEMKLRGEQDELLKEQAKLQALLGS-------------E 463
            L+++QA+ IL+ RLR L KLEE ++R E D L KE+A+++ALL S             E
Sbjct: 428 GLTDVQAEAILNMRLRSLRKLEEFEIRTEFDSLSKEKAEIEALLASGDKQWQAVAWEIGE 487

Query: 464 TKLKKLVRSELIKDAETYGDDRRSPIVERAEAKALTEHDLLPNEKVTVVLSEKGWVRSAK 523
            K K    +EL K   T+ D         A+ +A+ +  ++  E +TVV+SEKGW+R+ K
Sbjct: 488 VKKKFAKATELGKRRSTFSD------APDADVEAI-QQAMIEKEPITVVISEKGWIRALK 540

Query: 524 GHDIDATGLSYKAGDGFKTAAAGRSNQFAVFIDSTGRSYSVPAHTLPSARGQGEPLTGRL 583
           GH  D + L +K GDG K +   ++    +   + G++Y++    LP  RG GEPL   +
Sbjct: 541 GHIADTSSLQFKDGDGLKVSFPAQTTDKILIFTTGGKAYTLGGDKLPGGRGHGEPLRIMV 600

Query: 584 TPPPGATFECVLMPEDDGLYVIASDAGYGFVVKGEDLQAKNKAGKALL--SLPNNAKVIL 641
                       + +     +++S AG GFVV   D+ A  + GK ++  ++P+ AK+++
Sbjct: 601 DMENDQDVLTAFVHDPARKLIVSSTAGNGFVVTESDIVANTRKGKQVMNVTMPDEAKLVV 660

Query: 642 PRPVADREQNWLASVTTEGRLLIFKISDLPQLGKGKGNKIIGISGERVASREEYVTDIAV 701
           P      + + LA V    ++L+F +  +P++ +GKG ++       V+    +      
Sbjct: 661 P-----VKGDHLAVVGENRKMLVFPLVQVPEMARGKGVRLQRYKDGGVSDIRSF-----A 710

Query: 702 LPEGATLVLQAGKRTLSLKADDLEHYKGERGRRGNKLPRGFQR 744
           + EG T    AG R  +   D+L  + G+R   G  +P+GF R
Sbjct: 711 IAEGLTWEDSAG-RVFTKTRDELIEWMGDRAGAGRVVPKGFPR 752