Pairwise Alignments

Query, 754 a.a., DNA topoisomerase IV from Pseudomonas fluorescens FW300-N2E3

Subject, 755 a.a., DNA topoisomerase IV subunit A (RefSeq) from Shewanella loihica PV-4

 Score = 1020 bits (2638), Expect = 0.0
 Identities = 504/746 (67%), Positives = 609/746 (81%), Gaps = 2/746 (0%)

Query: 1   MSDSLDLSLDGVERRSLADFTENAYLNYSMYVIMDRALPHIGDGLKPVQRRIIYAMSELG 60
           MSD++DLSLDGVE+  L  FTE AYLNYSMYVIMDRALPHIGDGLKPVQRRI+YAMSELG
Sbjct: 1   MSDAIDLSLDGVEQMPLRRFTEEAYLNYSMYVIMDRALPHIGDGLKPVQRRIVYAMSELG 60

Query: 61  LDADSKHKKSARTVGDVLGKFHPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPDDPK 120
           L A SKHKKSARTVGDVLGK+HPHGDSACYEAMVLMAQPFSYRY LVDGQGNWGAPDDPK
Sbjct: 61  LSAQSKHKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPK 120

Query: 121 SFAAMRYTEARLSRYSEVLLSELGQGTADWGPNFDGTLDEPLVLPARLPNILLNGTTGIA 180
           SFAAMRYTEARLS++SEVLL+ELGQGT DWG NFDGTL EP+VLPARLP+ILLNG TGIA
Sbjct: 121 SFAAMRYTEARLSKFSEVLLTELGQGTVDWGVNFDGTLKEPMVLPARLPHILLNGITGIA 180

Query: 181 VGMATDVPPHNLREVATACVRLLDEPKATVEQLCEHIQGPDYPTEAEIITPRADLLKIYE 240
           VGMATDVPPHN RE+  ACV L+D PK  +E+L E + GPDYPTEAEII+PR ++ KIYE
Sbjct: 181 VGMATDVPPHNARELVDACVELIDNPKVDLERLMELVPGPDYPTEAEIISPRTEIAKIYE 240

Query: 241 TGRGSVRMRAVYHIEDGDIVVTALPHQVSGAKVLEQIAAMMQAKPSKAPQVADLRDESDH 300
           TGRGS++ RAVY +E G+IV+TALPHQ SG K+LEQIAA MQAK  K P VADLRDESDH
Sbjct: 241 TGRGSIKARAVYSVESGEIVITALPHQASGGKILEQIAAQMQAK--KLPMVADLRDESDH 298

Query: 301 ENPCRIVIIPVNSRVDHEALMQHLFASTELESSYRVNINIIGLDGKPQLKNLRALLVEWL 360
           E+P RIVI+P ++RVD + LM HLFA+T+LE ++RVN+N++GL+G+PQ+K L+ LL EWL
Sbjct: 299 ESPVRIVIVPRSNRVDCDQLMAHLFATTDLEKNFRVNLNVLGLNGRPQVKGLKQLLTEWL 358

Query: 361 EFRVQTVRRRLQFRLDKVERRLHLLDGLLIAYLNLDEVIHIIRTEEHPKAKLIERFALSE 420
           EFR+ TVRRRL+ RLDKV  RLH+L+ L+IA+LN+DEVI IIR  + PKA+L+ RF L++
Sbjct: 359 EFRLTTVRRRLEHRLDKVLARLHILEALMIAFLNIDEVIEIIRYHDDPKAELMSRFNLTD 418

Query: 421 IQADYILDTRLRQLAKLEEMKLRGEQDELLKEQAKLQALLGSETKLKKLVRSELIKDAET 480
            QA+ ILD +LR LAKLEE K++ EQ EL  E+ KL+ LL S+ ++K L++ EL +DAET
Sbjct: 419 EQANAILDLKLRHLAKLEEFKIKTEQSELEAEREKLELLLSSDRRMKTLIKKELKQDAET 478

Query: 481 YGDDRRSPIVERAEAKALTEHDLLPNEKVTVVLSEKGWVRSAKGHDIDATGLSYKAGDGF 540
           YGD+RRSP+VER+E++AL+E +L+P E VTVVLSEKGWVR AKGHDID T LSYKAGDGF
Sbjct: 479 YGDERRSPLVERSESRALSEQELVPAEAVTVVLSEKGWVRCAKGHDIDPTALSYKAGDGF 538

Query: 541 KTAAAGRSNQFAVFIDSTGRSYSVPAHTLPSARGQGEPLTGRLTPPPGATFECVLMPEDD 600
             AA+GRSN   VFI STGR+++   HTLPSAR QGEP+T R    PG +    L+ ED 
Sbjct: 539 LCAASGRSNHATVFIGSTGRAFATDTHTLPSARSQGEPVTTRFQLSPGESMAHALLGEDG 598

Query: 601 GLYVIASDAGYGFVVKGEDLQAKNKAGKALLSLPNNAKVILPRPVADREQNWLASVTTEG 660
             +++ASDAGYGF+   +D+ ++NKAGKALLSLP NA+V+ P+ V       + ++T EG
Sbjct: 599 QCFLLASDAGYGFIGDYKDMVSRNKAGKALLSLPANAQVLPPKRVDKSRSESILAITNEG 658

Query: 661 RLLIFKISDLPQLGKGKGNKIIGISGERVASREEYVTDIAVLPEGATLVLQAGKRTLSLK 720
           R+L+F +  LPQL KGKGNKIIGI+ +R  SREE +  + V+P+   + L AGKR L+LK
Sbjct: 659 RMLLFSVDALPQLAKGKGNKIIGIASDRAKSREELLVHLHVVPQDTAVTLWAGKRKLTLK 718

Query: 721 ADDLEHYKGERGRRGNKLPRGFQRVD 746
             DLEHY+GERGRRG KLPRG QRVD
Sbjct: 719 PSDLEHYRGERGRRGAKLPRGLQRVD 744