Pairwise Alignments

Query, 779 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

Subject, 841 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  275 bits (702), Expect = 1e-77
 Identities = 243/828 (29%), Positives = 384/828 (46%), Gaps = 90/828 (10%)

Query: 12  LFLTLLLAVLALAGWQWHDGAPLSANLMDLVPGTAPDALELKAEQRMQEPLNREMLVLVG 71
           ++L LL A+  LA      GA + ++++ ++P    D L  +A  R+++ L     + +G
Sbjct: 20  IWLVLLAAMALLAAQALSRGAGVQSDILAMLPKIQEDPLTQRAIDRVEQQLANR--IYLG 77

Query: 72  HTNREQAIAMTQKLGEQWLASGL------FEKVQWNLQADLPALRAQLLQGRLAMLSAAD 125
             + +QA A+    G + L S L      F +VQ        AL       R  +L+   
Sbjct: 78  VVSPDQATAIK---GAKQLLSALQGAPEAFTQVQSADMQGAQALNRFYFPYRFHLLTTQQ 134

Query: 126 RQQLIEQPQAFIQQRVQALFDPFTGF--SLVPSQDDWLGLTGRIQNSQPQHGSVQLDIGS 183
           +  L     A ++    A      G+  S + SQD  L     ++   PQ    +L +  
Sbjct: 135 KALLATGQLAKLEANTLAQLYNAFGYANSQLLSQDPLLLYPELLKQLSPQR---RLKVVD 191

Query: 184 GTLVA-----------DADGKSWVMLRARTSGNAF-----DMQLPLKVAELLKHSREEAA 227
           G LV            D  G S  ++ A+  G+AF     ++QL      + +  +    
Sbjct: 192 GILVGQELAQEARSNKDTQGNSVAIVMAQGVGSAFNPKAQELQLARLEEAISQMQQSLEP 251

Query: 228 QADVQLLAASGLLYAANGQQQATREITWVGGGATVGILLLLLLAFRRFRVL-LAFIPVLV 286
           + +V ++    L +AA    QA RE++ +G  + +G++LL+ LAFR    L +A + +  
Sbjct: 252 KQEVTVIKGGALFHAAAATTQAKREVSSLGLASLIGVILLVWLAFRSMMPLTIAALTIAT 311

Query: 287 GMLFGAVACVALFGHMHVMTLVLGSSLIGVAVDYPLHYLSKSWSLKPWHSWPALRLT--- 343
            +LF   A + +F  +H++TLV G+SLIG+A+DY  H+  +    +   S  A + T   
Sbjct: 312 SLLFALSATLWIFTQVHLLTLVFGTSLIGIAIDYSFHFYCERLQSQKAVSGTATQTTGIT 371

Query: 344 --------LPGLTLSLATSCIGYLALAWTPFPALTQIAVFSAAGLLGAYLSAVCLLPALL 395
                    P  +L+L T+ I YLA+  TPFP + Q+AVF AAGLLGAYL+ +   P L 
Sbjct: 372 ATDAVARVFPAASLALLTTVIAYLAIGLTPFPGMQQVAVFCAAGLLGAYLTLIFAYPKLA 431

Query: 396 KGTDLRPAQWPLRVAEFLVNVRAALLKRVRSSVLLVLVLAF---CAGGLWHLTTKNDIRQ 452
             T +RP    L +A   +N    + + +  +  + + L        GL  L   +DIR 
Sbjct: 432 NST-MRPGDRALGLATRYLNAMQTIARPINGAKGIAIALGLLLVAIFGLNRLGVNDDIRA 490

Query: 453 WVSAPPQLMNEAQTIARITGYQPTSQFFLVRAANQQQLLERQKALSDRLDQLVNLDKLKG 512
              +P  +    Q + ++      +QF LVRA   + LL R +ALS  L  L +   L  
Sbjct: 491 LQQSPLSVTQGEQRLRQVMSGGTDNQFILVRAETAEALLTRLEALSPTLGSLQHQGVLGN 550

Query: 513 YLALSQ-LVSLPSEQQQVR---EALNKLPAFWQPLLDLGIPATALQTELTQLQALPVEDI 568
            + L+  L S  S+Q+  R   +  +KLP   + L  LG+      + +   +A   E I
Sbjct: 551 SVNLAHYLPSQASQQEAYRLQGQIYHKLP---EVLAHLGLDGDLAPSLMASFEASANETI 607

Query: 569 --DAALVGPLAEPWRPLWLG---------------------------ASDGGV-AAMVSL 598
             D        E + PLWL                             SDG    A+V L
Sbjct: 608 TPDKFFASRAGELFAPLWLAPDGTDAQAQMQAQTQAQAKTQPSDKTSGSDGATYGAIVLL 667

Query: 599 QGLNDTALLRVQALDLPGVQLVDRLDDLNKVFAATQISAAELKLMSCALIV--LLLILPF 656
            G+ D   L      L GV LVD++ D++ V A  +  +  L L+  AL+V  L+  L F
Sbjct: 668 GGITDLDDLTQAISPLSGVTLVDKVQDISDVMA--KYRSLTLSLLGLALVVAGLIFSLRF 725

Query: 657 GFGGALRLVALPLLAALCSLASLGWLGQPLTLFSVFGLLLVTAISVDYAILMREQIGGAA 716
           G   AL + A+P LAAL +LA LG  G PLTLF    L+LV  I VDY++   E   G  
Sbjct: 726 GLKMALWITAVPALAALLTLAGLGLAGSPLTLFHALALILVFGIGVDYSLFFAESHRGEG 785

Query: 717 VSLLGTLLAAATTWLSFGLLAISSTPAVSNFGLSVSLGLAFSFILAPW 764
           V ++   ++A +T ++FGLLA S TPA+  FGL++ LG+  +F+L+P+
Sbjct: 786 V-MMAVFMSACSTLMAFGLLAFSQTPAIHYFGLTLLLGIGLTFVLSPF 832